Runella rosea: DR864_17820
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Entry
DR864_17820 CDS
T05537
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
run
Runella rosea
Pathway
run00470
D-Amino acid metabolism
run00550
Peptidoglycan biosynthesis
run01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
run00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DR864_17820 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DR864_17820 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
run01011
]
DR864_17820 (murD)
Enzymes [BR:
run01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DR864_17820 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
run01011
]
Precursor biosynthesis
Amino acid ligase
DR864_17820 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
Pyr_redox_2
DAO
AlaDh_PNT_C
HI0933_like
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AXE19468
UniProt:
A0A344TLE7
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All DBs
Position
complement(4242538..4243914)
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AA seq
458 aa
AA seq
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MISRNTFKTVVLGGGESGVGAALLAQAKGFNVFLSDKGTLSDEFRNVLNVHGIDFEEGKH
TEERILAADEVIKSPGIPDTAPLVKKLYAQGTPVISEIEFAARYTKARKIAITGSNGKTT
TTLLTYHLLKSAGFNVGLAGNIGESFAKQVIEDRFDWFVLELSSFQLDNMYQFKADIGIL
LNITPDHLDRYEYTFQKYVDSKFRLLQNMQPGDDFIYFVDNEAIASELDKKPFMVNHLPI
SFVKKDSNGGFFHEGKLQLTRHPRTFEISADKLPIKGPHNAINAMAATLAAMAAGVSDEQ
IRQGLLTFQNAAHRLEPVAEINGIKFINDSKATNVDSVYYALNSFNTPIIWIAGGVDKGN
DYTQIEDLVRQKVKALICLGKDNSKLLSFFTPIVPVIIETQDVSKAVAHAVSLGHPDDIA
LLSPACASFDLFKNYEDRGDLFKAAVLDFALNSQKNDE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccgaaatacctttaaaaccgttgttttaggcggaggtgaaagtggtgtaggt
gcagcattgctcgcccaagccaaaggatttaatgtatttttatcagataaaggcacttta
tctgatgaatttcgtaatgtcctgaatgttcatggcattgactttgaagaagggaaacac
accgaggaacgaatcttggctgccgatgaggtcattaaaagcccgggaattcccgatacg
gctccgttggtcaaaaagctatatgctcagggaacacccgttatttcagaaatagaattc
gctgcgcggtacacaaaagcaagaaaaatcgcgataacgggcagtaatggaaaaacaacc
acaaccttactcacgtatcatttactcaaatctgcaggctttaatgtaggtttggcgggc
aatatcggcgaaagctttgctaaacaggtaattgaagatagatttgattggtttgtacta
gagttaagcagctttcaattggataatatgtaccaattcaaagctgacattggtatatta
ttaaacattacccctgaccacttggatcggtacgagtatacttttcagaaatacgtcgat
tctaagtttcgattacttcaaaatatgcaacccggcgacgattttatctattttgtagat
aatgaagccatcgcttccgaattagataaaaaaccgttcatggtgaatcacttacctatt
tctttcgtaaaaaaggatagcaatggcggtttttttcatgaaggaaaattgcaactgacg
cgccatccccgtacttttgagataagtgcggataaattaccgatcaagggtccacataat
gccatcaatgccatggcggcaacgttggcggctatggcggctggggtaagtgatgagcaa
attcggcaaggtttattgacatttcaaaacgcggctcatcggcttgagcccgtggcagaa
atcaatggcatcaagttcatcaatgattcaaaagccaccaatgtagactcggtttattac
gcacttaacagttttaataccccaattatttggattgctggcggagtggataaaggcaac
gattatacccaaatcgaagacttagttcgccagaaagtaaaagcccttatctgtctgggc
aaagataatagcaaacttctctcgttttttacccctatcgttcctgtaatcatcgagaca
caggacgtaagtaaagctgtagctcatgctgtttcgttaggtcatcctgacgacattgct
ttgttgtcgcccgcttgcgccagtttcgatttgttcaaaaattacgaagaccgtggcgat
ttattcaaagcggctgttctggattttgcacttaattcccaaaaaaacgatgaataa
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