Runella rosea: DR864_17895
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Entry
DR864_17895 CDS
T05537
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
Organism
run
Runella rosea
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
Big_1
Motif
Other DBs
NCBI-ProteinID:
AXE21607
UniProt:
A0A344TSI6
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Position
complement(4262590..4265775)
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AA seq
1061 aa
AA seq
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MSQNNYVKNNAERLRLVGRRTVGTTLAILFSLSVWAQSYTVKGKVTDTNGQPIPGATVQV
PGTATGTAANIDGEFTLPLTGNVKLTFSAVGYSSVSRDVNSSQSIINVSLREDQLNLDEV
VVTGSTLRAERRQLGNAITTIKADNLEKSGTPNLVSALQGKVPGAQITQNSGDPAGGITI
RLRGVKSIQGSSDPLYVIDGVIVNNETSSVSQLALSLGSQAPNTSLGTNRLADINPNDIE
SLNVINGAAAAAQYGSRAANGVVIITTKRGKSGAPKINFSTSFSSNELRKGVFISTLGKQ
FGFRDLRLHTIGVISPAQIAANPGTTTVGIVRDGATSQLASNLVDVTRYNYFDQIFRTGL
GNDNTVSISGGTDRTQYFVSASYMKNEGIVKGVDFRRVGLRARVDQRLTNWAKLSAGLNY
SNSFSNEKPNGNVFYSPINSVTITNNIYDITQRDAAGNLLAVEPTRVNPLTTVEAMQFTQ
AVNRTIADAQLNLTPIKGLGIDWIVGVDTYSQLGKNYIPPYPYQAVAGLPAERYPDGFAA
NATNNVTQFNSDINATYEIDLSKDLKINAAAGFNYQFYQADFTRASGLNTAPFIETVSGA
ASTTVTAGYGLDRYNLSGFFAQATIGYKNLAFLTGAIRRDRSSKFSPAETNQTYPKISGS
FVVSDLGFWENSGLTGIWDGFKLRASYGQAGNLTGIGSYSRFWQFSPVPFLGKNTIIPGS
TLANPRVRPERMEEVEVGADLSFLKSRVNIGVSVYNQQIKDLVVNRELAPSTGGTGIVNN
VGTMENKGFEISLNALAVKKNDFSADFTVIYNQNRNKILDIDQGNPKTSTLTIGNSAGAP
VFLIEGQPASVFYGWPYAYNPDGSLLLTPQNLPQRERGTQDPNDPTKFTVSRAADGQPTG
AFVRTVIGNPNPKWTGSFSGNFTYKKVGLRFLLDAVQGVQVFNADKRTRNNVGIGDIAEA
EMLGTMARGYVFSLANIEEYRVDDGSFTKLRELALTYQLPKVKGITTWNVSLIGRNLISW
DKYNGFDPETNAGNNSDILRGVDFGNVPIPRTYQVQLNLSF
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaacaattacgttaaaaacaatgcagaaagactgcgtttggtagggcggcga
acggttggaacaaccctggcgattttattttcgcttagcgtttgggcccaatcttatacc
gtaaaaggaaaagtaaccgacaccaacgggcagccaatacctggagctacggtacaggta
ccaggaactgcgacaggaaccgccgcaaatatagacggcgagtttaccctgcctttgaca
ggaaatgtaaaactaactttcagcgccgtgggttacagttcggttagccgcgacgttaat
tccagccaatctatcatcaatgtatctctgcgggaagaccaactcaatctggacgaagtg
gtcgtaacaggttctaccttacgcgctgagcgccgtcagttgggaaatgccattacgacc
attaaggccgataatcttgaaaaatcaggaacgccgaacttagtaagcgccctccaaggc
aaagtaccaggagcgcaaatcacgcaaaactctggtgacccagcgggtggaattacgatt
cgtctacgcggggtgaaatccattcaaggaagctctgatcctttgtacgttattgacggg
gtaatcgtcaacaacgaaacttcttctgtgtcacaactagccctttctttgggaagccaa
gcccccaatacatctctgggcaccaaccgtttggccgacatcaaccccaatgatattgaa
agcctaaacgtcattaacggggctgcggccgcagcccaatatggttcacgggccgccaat
ggagtagtgattatcacgaccaaacgcggtaaatcaggtgctcctaaaatcaacttttcg
acaagtttttcttccaatgagcttcgaaaaggcgtgtttatttcaacgcttggcaaacaa
ttcggtttccgagatttgcgcttacacaccattggtgtcatttcacctgcccaaatcgca
gccaaccctggcacaacgaccgtaggaattgtacgcgatggtgctacttcgcaattagct
tccaacctcgtggacgtaacccgctataattatttcgaccaaattttccgcacaggactc
ggcaacgacaacaccgtctccatttcaggaggaacagaccgcacacagtactttgtttca
gcttcttacatgaaaaacgaaggaattgtgaaaggagttgattttcggcgggttggcttg
cgcgcacgcgttgaccaacgacttaccaattgggctaaactatcggcagggttaaattat
tccaacagcttctcgaatgaaaaacccaacggaaacgtgttttatagccccattaactcc
gtaacaattaccaataacatttacgacatcacacaacgcgatgccgccggtaacttgttg
gcggtggaaccaacccgggtcaacccattgactacggtagaagccatgcagtttacacaa
gccgtaaaccgcacgattgccgacgcacaactaaaccttacgcctatcaaaggattagga
attgactggattgtaggagttgacacctattctcaattagggaaaaattatattcctccg
tatccttaccaagcggtagctggactacccgccgagcgctatcctgatgggtttgccgcg
aatgccaccaataacgtaacacaattcaacagtgatattaacgctacttacgaaatcgac
ctaagcaaagaccttaaaatcaatgcggcggccggtttcaactatcagttttaccaagct
gattttacccgggcaagcggtctgaataccgcaccattcatcgaaacggtaagcggagcc
gccagcaccaccgtaacggcaggttatggcctcgaccgttataatttgagcggtttcttt
gcgcaggcaaccattggttacaaaaacttagccttccttactggggctattcgtcgcgac
cgttcttctaaattctcgcccgccgaaaccaaccaaacctatcctaaaataagcggtagc
ttcgtcgtatctgacttaggtttttgggaaaacagcggcctgactggcatttgggatggt
ttcaaacttcgcgcttcgtacggacaggcggggaacttgactggaattggaagttatagc
cgtttttggcaattctcacccgttccgttcttaggcaaaaacaccattataccaggcagt
accttggccaaccctcgtgtacgtccagagcggatggaagaagttgaagtgggagctgac
ctttcgttcttgaaaagtagagtgaacatcggtgtttcggtctataaccagcaaatcaaa
gacctcgttgttaaccgtgaattagctccttcaacgggtggtactggtatagtaaacaac
gtaggaacgatggaaaacaaagggtttgaaatcagtctgaacgcattggccgtaaagaaa
aacgatttctcagccgactttacggtgatttataaccaaaatcgtaacaaaattttggac
attgaccaaggcaatcccaaaacttcaacccttaccatcggcaactcagcaggcgcgcca
gtgttcttgattgaaggtcaacctgcaagtgtattttatggatggccatatgcttacaat
cccgacggctcactactcttgacgcctcaaaatcttccccagcgcgagcgcggaacccaa
gaccccaatgatcctactaaatttaccgtgagtcgcgctgctgatgggcaacctacaggt
gcttttgtacggacggttatcggaaaccccaacccaaaatggacaggttcgttcagtgga
aattttacttataaaaaagtgggtcttcgcttcttattggatgctgttcagggtgtacag
gtgttcaacgccgacaaacgcacacgtaacaacgtgggtattggtgacatcgcggaagcg
gaaatgctcggaaccatggcacgtggttacgtattttcactagccaacatcgaagaatat
cgcgtggatgatggctcatttaccaaattacgtgagttggctcttacttaccaattgcct
aaagtaaagggaatcacgacttggaacgtttctttgattggacgtaacctgatttcttgg
gataaatacaacggttttgaccctgaaaccaacgctggaaacaacagcgatattttgcgc
ggagttgacttcggtaacgtgcccattcctcgtacctatcaagtgcagttgaacctatcg
ttttaa
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