Runella rosea: DR864_20960
Help
Entry
DR864_20960 CDS
T05537
Name
(GenBank) SusC/RagA family protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
run
Runella rosea
Brite
KEGG Orthology (KO) [BR:
run00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
run02000
]
DR864_20960
Transporters [BR:
run02000
]
Other transporters
Pores ion channels [TC:
1
]
DR864_20960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
Dockerin_1
EF-hand_5
EF-hand_1
Motif
Other DBs
NCBI-ProteinID:
AXE20042
UniProt:
A0A344TN21
LinkDB
All DBs
Position
5046329..5049559
Genome browser
AA seq
1076 aa
AA seq
DB search
MKPKFYYPLMCAVAWMFILFLAPGSAHAQDRKVTGKVVANDGPVPGATILLKGSNVGTSA
DANGAFTINVSGANPVLVISAIGYKPQEVTVGNQSVVNVKIEDDVNALTEVIVTGYSIDS
RRETTGAVSTVKAKDLTVRPSGNVEQQLQGRVAGLTVITNGQPGTASQVRVRGFGAFGGN
EPLYVVDGVPVGSTDFLAPDDIETTTVLKDAAAASIYGARAANGVIVYTTKKGSKGAKKL
NISYDGMYGVTLAGEGQKMMNPTDFATWTWNAKRNSNEAFGHPQFGSGSTPVIPDYLTVG
GRSGVVGTVDLAAEKAKYNVDPTAGSIYQVVKANKEGTDWYKAITRNAALQRHALGFSGG
GENSRFYIGFGAQNQQGILKGNDFTRYTFRANSEFNVLKNVRIGQNLQFTYRSILGQSGG
AGGNGVAADENDILSAFRMPSIIPIYDEFGGYAGTAAKGFNNPRNPVASRDGQANNRSFN
ANGFGNIYAEWDPIPGLTLRSSLGGQYNNFYNWGYSRLQYENSENNSAFGYNEGGGWSFG
WVLTNTATYKKQFGKHNVEVLAGQEALNTGKGRNMNGSGLNPFSTDINYVNLSNVSASGR
VVNSSLFSGVNFYSVFGRVNYIFNDKYIVTGVVRRDGSSRFGANNRFGAFPAFSAAWRIS
SEPFMKQLTWVSDLKIRGGYGTMGNSNNVDPNNQFSLYGASIGNSAYDINGSNSSTAEGY
YRTRIGNPDAKWETSITKNIGIDGTFLNGKLDVVIDFWQKDTKDLLYQLPITATAGPFAS
PPSVNIAKMANKGIDILVTNRGRITKDLSYDVTFTGGTLSNEIVAVAPNVNYLTNVNPGF
RGINPIRNQVGYSISSFYGYKVIGLFQNAEEVKNAPTQDGAGPGRFRYADINGDGKINAD
DRTYLGSPVPKFTAGLSLGFKYKGWELEAYLNGFFGNKIFNVSKWFTDFYPSFAGAAISE
RVKDSWTPSNTGATTPIFETASNFSTNTQSNSFYVENGSYVRFQNITLGYNLPASALSKA
RIQRLRVFASTNNIFTLTKYSGLDPGVGGNADTNFGIDVGNYPLTKGWTVGLNLGF
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaagttctattatccgctgatgtgtgcggtggcatggatgtttattctattc
cttgctcctggttcggcacatgcacaagaccggaaagtgacgggaaaggtcgttgctaac
gatggacctgttcccggagcaaccattttattgaaaggcagcaatgtaggtacctctgct
gatgccaatggagcattcactattaacgtgagtggggcaaatcctgtgttggtgatttca
gccatcggttacaagccacaagaagtaacggtaggcaatcagagcgttgtaaatgtaaaa
attgaagacgatgtgaatgccttaacggaagtaatcgtaacgggttactccatcgacagc
cgccgtgagacaacgggggcggtttcgacggtaaaagcaaaagacctcaccgttcgccca
tcgggcaacgttgagcagcagttgcagggtcgtgtggctggtttgacggttattactaac
ggacagcctggaactgccagccaagtacgcgtacgcggatttggtgctttcggtggtaac
gagcctttgtacgttgtagacggagtacctgtaggttcaactgactttttggctccagat
gacatcgagacaactacggtgttgaaagatgctgccgcagcctctatctatggtgcgcgc
gctgccaacggggtaattgtatatacgaccaaaaagggttcaaaaggagcaaagaagctg
aacatcagctacgatggcatgtacggggtaacgcttgctggggaaggtcagaagatgatg
aacccgactgattttgccacttggacttggaacgccaaaagaaactcaaacgaagcattc
gggcaccctcagtttggttcaggttctactcctgtcattcctgattaccttacagtaggt
ggtcgttcaggggttgtaggtacggttgatttggctgctgaaaaagccaaatacaatgtt
gatcctacggcaggctcaatctatcaggtagtaaaagccaacaaagagggtactgactgg
tataaagctatcacgcgtaatgctgccctgcaacgtcacgcacttggattctctggcggt
ggcgaaaatagccgtttttacatcggattcggtgctcagaatcaacaaggtatcttaaaa
ggaaatgattttacacgttataccttccgggccaacagcgagtttaacgtgttgaaaaac
gtacgtatcggtcaaaaccttcaattcacctaccgttcgattttaggacaatcgggtggt
gctggtggaaacggggttgcagctgacgaaaatgacatcttaagtgctttccgtatgcca
tccatcattccaatttatgacgagtttggtggttatgcaggtacggccgcaaaaggattc
aataacccccgtaacccagttgctagccgcgacggacaggctaacaaccgtagttttaac
gcaaatggtttcggaaacatctatgccgagtgggatccaatcccaggtttgactttgcgt
agcagccttggtggacagtacaataacttctacaactggggttatagccgtttgcaatac
gaaaactctgaaaacaactcggcgtttggttataacgaaggcggtggctggagctttggc
tgggtattgaccaacactgccacttacaaaaagcaatttggcaagcataacgtagaggta
ttggcaggccaggaagccttgaatacgggtaaaggtcgtaacatgaacggtagtggtttg
aatccattctctactgacatcaactacgtaaacttatccaacgtaagtgccagcggaaga
gtagtaaatagtagccttttttcaggtgttaacttctattcagtattcggtcgtgttaac
tacatcttcaacgataaatatatcgtaacaggggtggttcgtcgcgacggttcttcacgt
ttcggagctaacaaccgtttcggggcattccctgcgttctcggccgcatggcgtatttca
tcggagcctttcatgaagcaattgacatgggtttcagatttgaaaattcgcggtggttat
ggtacaatgggtaactcaaacaacgtagatcccaacaaccagtttagcttatacggtgcc
agcatcggaaactctgcttacgacatcaacggctctaattcaagcaccgccgaaggttac
taccgtacgcgtatcggtaaccccgatgctaaatgggaaacttcaatcaccaaaaacatc
ggtatcgacggaacgttcttgaatggtaaattggacgtagtgattgacttctggcaaaaa
gataccaaagatttattgtaccaattgccaatcacggcaactgctggaccatttgcctca
cctccatcggtgaacatcgcaaaaatggccaacaaaggtattgacatcttggtaaccaat
cgtggtcgtatcactaaagacctgtcttatgacgtaactttcactggtggtacattgagc
aacgaaattgtagcggtagcgcctaacgtaaattacctcaccaacgtaaaccctggcttc
cgtggtatcaaccctatccgtaaccaagtaggttattcaatctcttctttctacggttat
aaagtgattggcttgttccaaaacgccgaagaagtgaaaaatgctcctacgcaggatggt
gctggcccaggccgtttccgttatgctgacatcaacggcgatggaaaaatcaatgccgac
gaccgtacctatttgggtagcccagttcctaaatttaccgcaggtttgagccttggcttc
aaatacaaaggatgggaattggaagcatatttgaacggtttctttggcaacaaaatcttc
aacgtatctaaatggttcactgatttctacccttcatttgcaggggccgccatcagcgag
cgcgtgaaagattcatggacgccaagcaatacaggtgctactactccaatcttcgaaaca
gcatcaaacttcagtaccaacacccagtctaactcgttctacgtagaaaacggtagctat
gtgcgtttccaaaacatcacgttaggatacaacctccctgccagtgcgttgagtaaggcc
cgcatccagcgcttgcgcgtatttgcttctaccaacaacatctttacccttactaaatac
tcgggcttggatccgggtgtaggtggtaacgctgatactaacttcggtatcgacgtaggt
aactacccactcacaaagggttggactgttggtttgaaccttggattctaa
DBGET
integrated database retrieval system