Runella rosea: DR864_25730
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Entry
DR864_25730 CDS
T05537
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
run
Runella rosea
Pathway
run02020
Two-component system
run02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
run00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DR864_25730 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DR864_25730 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
run03021
]
DR864_25730 (rpoN)
Transcription machinery [BR:
run03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DR864_25730 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
DUF3164
CCP_MauG
MarR
LacI
Motif
Other DBs
NCBI-ProteinID:
AXE20896
UniProt:
A0A344TQH5
LinkDB
All DBs
Position
complement(6269764..6271218)
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AA seq
484 aa
AA seq
DB search
MQKLSLNQTLQQKLSPQQIQFIKLLQIPTAELETRIEEELEINPALEEGMEEDMLSKDEY
NNDSEDDYADDYNQRDDISLDDYLHHDEYAGYKMYSDGNHPEEDRDMPIATMSTLHDALI
QQFGFLRLNERQTVIGLQLLGSIENDGYIRRSLQAIVNDLAFSQGFYSTIEEVETVLKKI
QTFDPPGIGARNLQECLLLQLDRKDPLDPNVTFAIKIIEDFFEEFSKKHYEKIQKRLGIN
DEQMKNVICLITKLNPKPGSVEGEDGLAHYLLPDFWVSNTNGKLEVHLNSKNAPELRISR
SFADMLDTYDKSDKTNRHIRETVTFVKQKLDAAKWFIDAIKQRQNTLQRTMNAIVNYQYE
FFVDGDETRLKPMILKDIANRIEMDVSTVSRVANSKAVQTEFGVYPLKYFFSEGISTDYG
EDASSREVKSILKEFIENEPKSNPLSDDKLEKLLNDRGYNIARRTVAKYREQLNIPVARL
RKQL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaattaagcctaaaccaaacgctacagcagaagctgtcgcctcagcagatacag
ttcattaagttattgcaaattcccacggcggagttagaaacgcgcattgaagaggaacta
gagattaatccagcgttggaagagggaatggaagaggatatgctctcgaaagatgaatac
aataacgattcggaagatgattacgctgatgattataaccagcgcgacgacatcagtctg
gatgattatcttcatcatgatgaatacgcaggttataaaatgtatagcgacggcaaccac
cccgaagaagaccgggacatgccgattgcgaccatgagtacacttcatgacgcattgatt
caacaattcggttttttacgcctcaatgagcgccaaactgttattggtctgcaattgttg
ggaagcattgaaaacgacggttacatccgtcgctcactgcaagccatcgtcaatgatttg
gctttttcacagggtttttattcgaccattgaagaagttgaaaccgttctaaagaaaatc
cagacgtttgaccctcctggtatcggggcacgaaatctgcaggagtgtctgctgcttcaa
ctagaccgtaaagaccctttagacccgaacgtgacgtttgccatcaaaataatcgaagac
ttttttgaagagttttcgaaaaaacactacgaaaaaatccagaaacgacttggcatcaat
gatgaacaaatgaaaaatgtgatttgtctcatcaccaagctaaatccaaaacctggctcg
gtggagggcgaagatgggctagcgcattatttattgcctgatttttgggtgagtaacaca
aacggcaaattggaagtgcatcttaattccaagaatgcccctgaactgcgcatcagccgt
tcgtttgccgatatgcttgacacctacgataaaagcgacaaaacaaaccgtcatatccgc
gaaacggtgaccttcgtcaaacaaaaattggatgcggccaaatggtttattgatgccatc
aagcaacgccagaatacgcttcagcggacgatgaacgccatcgtcaattaccaatatgag
ttctttgttgatggtgacgaaacacgtttgaaacccatgattctgaaggatatagccaat
agaattgaaatggatgtttcgaccgtatcgcgcgtggccaatagcaaagccgtacaaaca
gagtttggcgtttatcccctgaaatatttcttttcggaaggaatttcaacggactacggc
gaagatgccagcagccgagaagtaaaatctatattgaaggagtttatcgaaaacgagccc
aaaagtaatccgctttcggatgataaattagaaaaactccttaacgaccgagggtacaac
attgcccgccgaacggtggcaaaataccgtgagcaactcaacattccggtagcccgtttg
agaaagcaactttag
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