Runella rosea: DR864_25875
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Entry
DR864_25875 CDS
T05537
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
run
Runella rosea
Pathway
run00300
Lysine biosynthesis
run00470
D-Amino acid metabolism
run01100
Metabolic pathways
run01110
Biosynthesis of secondary metabolites
run01120
Microbial metabolism in diverse environments
run01230
Biosynthesis of amino acids
Module
run_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
run00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DR864_25875 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DR864_25875 (lysA)
Enzymes [BR:
run01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DR864_25875 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AXE20924
UniProt:
A0A344TQK3
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All DBs
Position
complement(6304239..6305501)
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AA seq
420 aa
AA seq
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MISELAQIIMQLVNDRYEIQGIPVLDIAQQFGTPLYVYDADKIVDKINQLRNAFSSVDLK
IKFACKALTNVSILKLMRQNGVELDVVSPQELELGLHAGYEGSQITFTPSGVSFDEIETA
VAVGSIINLDNLIVLEKFGQRFGGTVPCMIRIKPNVAAGGNAKIMTAHEGSKFGIDIRQR
EDILRIVNQYGINVVGLHQHTGSDIKEANAFVRAADVIFNFAKDFPNLKIIDLGGGFKVA
YKEGDPITDMPALGAKLSEAFLALSEQLGRKLQLWFEPGKFLVSESGILLVNANVVKSTP
NRTFVGVNSGLNHLIRPMMYDAYHHIVNVSNPVSTQLKTYDVVGYICETDTFATDRPLTE
VHENDTLALLNAGAYGFTMSSQYNSRFRPAEVLVYQGKAHIIRQRETMEDILKNQVLLEL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgaattagcccaaatcatcatgcaattagtaaacgaccgttacgaaatccaa
ggaatacccgttttagacatcgcgcagcaattcggaaccccgctctatgtatatgatgcc
gacaagatagtcgataaaatcaatcagttgcgtaacgccttttcatcggtcgatttaaag
ataaaatttgcctgcaaagccctaaccaatgtttccatcctaaaattaatgcgccaaaac
ggggtggaattggacgtagtttcgccgcaggaattggagctaggtctgcacgctggctac
gaaggctcacagattacttttactcccagcggggtttcctttgatgaaatcgaaacggcc
gtggccgtaggctcaatcatcaacctagacaacctgattgtcctcgaaaaatttgggcaa
cgttttggtggaactgtaccgtgcatgattcgcatcaaacccaacgtggccgcaggtgga
aacgccaaaatcatgaccgcgcacgaaggttctaaattcggcattgacattcggcaacgc
gaagatattctgcggattgtgaaccaatacggcatcaacgtcgtaggattgcaccagcat
acgggttctgacatcaaagaagccaatgcctttgtacgcgccgctgacgtaatttttaac
tttgccaaagattttcccaacctcaaaatcatcgacttaggcggaggctttaaggtagcc
tacaaagaaggggaccctatcaccgacatgcccgcgctgggcgctaaactcagtgaagcc
tttctagctctaagcgagcaattgggccgcaagcttcaattgtggtttgagccgggcaaa
tttctggtcagcgaatcgggcattctgttggtaaacgccaacgtggtaaaatcaacccct
aatcgcacttttgtgggggtcaattcgggccttaaccacctgattcgtccgatgatgtac
gatgcgtaccatcacattgtcaatgtttcaaatcccgtttctacccaacttaagacctac
gacgtagtaggctatatctgcgaaaccgacacctttgccaccgaccgtccactcacggaa
gtgcatgaaaatgatacccttgcgttgctcaacgcgggtgcttacggatttacgatgagc
agccagtacaacagccgttttcgccccgccgaggtgttggtctatcagggcaaggcacac
atcattcgccaacgcgaaacgatggaagacattctgaaaaatcaagtacttttggaacta
taa
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