Runella sp. SP2: DTQ70_02485
Help
Entry
DTQ70_02485 CDS
T05690
Name
(GenBank) DUF11 domain-containing protein
KO
K21449
trimeric autotransporter adhesin
Organism
rup
Runella sp. SP2
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rup02000
]
DTQ70_02485
Transporters [BR:
rup02000
]
Other transporters
Pores ion channels [TC:
1
]
DTQ70_02485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLIPPER
F5_F8_type_C
BamM_C
F5_F8_type_C_2
DUF7619
DUF6663
CARDB
Adap_comp_sub
TSP3_bac
Motif
Other DBs
NCBI-ProteinID:
AYQ31113
LinkDB
All DBs
Position
616224..619331
Genome browser
AA seq
1035 aa
AA seq
DB search
MLVACLGMLVGWPLVSFANSSPKKAAPMVANPDCYKDWNLAANKTGITITSGLNTGGGNL
AALRDGDAATNGFWFQASQAIANKEVYKFVFPSAAILNGIEIVANTPLTNGATYRVEGSN
DGSNWTDLTGTQTFSSTATAPAYGASGNSRKFPITGNTTPYLQYRIYGLSSTTANSWTNE
LYFGSPVLTAGLSDISCTYGANTSTTADDEITFKLNPQGGTGTYSVAVSSGSVTPTTGTY
GTTTNFKLQPGSVGAGNVSLIITNTTITCDITETIVDPGVVPFVDTDGDGIGNKVDLDDD
NDGILDTVEDAYCGAVNYNTNLTNKAKLQVSTDAAVTGSISVLLDGNIANNSFYYTGTAQ
AVAGKTYVRVDFVKPTLLKGMELAVGAYLFSNGAVIKVQGSNDGTNWTDIVSSTRTATTA
ACIYGTCDDAETFPFAANITAYKSYRLLGVSGTSRSTPWINELFVNTAVQGVCDFDGDGI
ANSLDLDSDNDGIPDNVEAQPTLTYVASNADNAATYTTNNGVNSAYLGGLTPLDTDTDGC
EDFLDTDSDGDLDLDKVESGLTFNGVPGLNGLDSGSETADTYADVNGIVDVPKNVLASSN
PGVGEVKYREIPPLKRTITVCYRTGKDYGIGGAQRTDAATKLLSAANFSLTGTSTFTFKL
VPFTVAFTKTGLEAAGCQIVDLGIDNTDAGGATGAYTAAEKTELNNWNAASKSNVILAFQ
NYAGVFVSGYTGVSGNTNPNALTTLGESVISGPFGSVVGFNQGGGYTGSYSAIPASACVI
VQDNASPTKRTTGVIDKTTNDIYLADVDLITELGGLTTGSTITSNTDKFFANLYHSLAKL
VVFAPTDPCTYFSCVAGQNSPTLNSTSISGSGSVNLSTITASNLPASTTLTWHTGTPATT
ANKIANPTAYTTSGTVYAAFFDAASNCYSGAGVATTAVNVTITAAVPQANLSVAVATPIS
QTGAQGEQLTYTVTLTNAGPATATNVIVSVPIPEPAASLLTVSPASGTYNGTTKQWTVPS
LAVGNTTLTFTLKVN
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggcgtgtttggggatgttggtgggctggccattggtatcctttgccaattct
tcccccaaaaaagctgctccgatggtggcgaatcctgattgctacaaagattggaactta
gcggccaataaaacgggtattaccatcacttcggggttaaatactggtggaggaaacctc
gctgcactcagggatggggatgccgcgaccaacggtttttggttccaagcgagtcaggcc
atagccaacaaagaggtatataaatttgtatttccctcggcggcgattttgaatggaatt
gaaattgttgctaatacacctctcaccaacggtgcaacgtatcgggttgaaggaagtaat
gatggatcaaactggacagatttgacggggacgcaaacgttttcatcaaccgcaactgct
cctgcctatggggcatcgggtaactcccggaaattcccaattacgggaaatacaactccc
tatttgcaatatcgtatttatggtctttcaagtacaacagccaatagctggaccaatgag
ctttactttggaagccctgttttaacggcaggtttgtcggatattagttgtacctacgga
gcaaataccagtacaactgcggatgatgaaattacctttaaactcaaccctcaaggaggt
actggtacgtattcagtagctgtttcgagtggttcggtgacaccaacgacaggtacgtac
gggacaacgacaaactttaagcttcaaccaggttcggtgggagcaggcaatgtttccttg
ataattaccaatacaacaattacctgtgacatcaccgaaacgatcgttgatccaggcgtc
gtaccttttgtggataccgacggcgatggcattggaaataaagtggatttggacgatgac
aacgacggtatcttggatacggtcgaagacgcgtattgtggagcggtgaattataatacg
aacctcaccaataaagccaagttacaagtgtcaacggacgccgcagttacaggaagtatt
agcgtgttattggatggaaatatcgccaataattcattttattatacgggaacagctcaa
gcggtggcagggaaaacctacgttcgagttgactttgtgaagcctaccttgttaaaagga
atggagttggcagtgggagcgtatcttttctccaatggagcggtgataaaagtgcaagga
agtaatgatggtactaactggacagacattgtttcttcgacgcgcacggcgactactgct
gcttgtatttatggtacttgtgatgatgctgaaacatttccttttgccgccaatataact
gcttacaagtcatatcgtttgttaggggtttctggaacgtctcgttctacgccttggatc
aatgagctgtttgtcaataccgccgttcaaggtgtgtgtgattttgacggagatggcatt
gccaatagccttgatttagattctgacaatgacgggattcctgataacgtagaagctcag
cctacccttacttacgttgcctcaaatgcggataacgcggctacttatacaaccaacaat
ggtgtaaactccgcgtatttgggtggattgaccccgctagataccgacactgatggttgc
gaagattttttggataccgactcagacggagatttagatttagataaagtagagtcaggg
ctaaccttcaacggagtaccaggcttaaatggtttggacagtggctcagaaacagccgat
acttatgcggatgtcaacgggattgtcgatgtgcctaaaaatgtactggcaagttcaaat
cctggcgtaggtgaagtcaaataccgcgaaattccaccattgaagcgaacgattacagta
tgctatagaacaggaaaagactatggtattggaggggcgcaacgcacagacgctgctact
aaactgctcagtgctgccaactttagccttacaggtacttctacttttacctttaaatta
gtcccctttacggtggcctttaccaaaacagggctcgaagcagcgggttgccaaattgtg
gatttggggattgacaataccgacgcaggtggagcaacaggtgcttacactgcggccgaa
aaaacagaacttaataactggaatgcagcctctaaaagcaacgtgattttagccttccag
aactatgcaggcgtatttgtgtcgggatatacaggggtatcaggtaatactaaccccaac
gccctaactacattgggagaatctgttatcagtggtccgtttggtagtgtggtagggttc
aaccaaggaggtggatatactggctcatactcagccattccagcttctgcttgcgtgatt
gtacaagataatgccagccccactaaaagaacaacaggggttattgacaaaactaccaat
gatatttatttggcggacgttgacttgattaccgaattaggtgggctaacgactggaagt
acaataacaagtaataccgataagttttttgccaacctatatcattcgttggccaagcta
gtcgtgtttgcaccgaccgatccctgtacttattttagttgtgtagcgggacaaaattct
cctacgttaaacagcacttcaatttctggctcaggttcggtcaatctttcaaccattact
gcctctaatttacctgcaagtacgacgctcacatggcatactggcacgcctgcaaccacg
gccaacaagattgcgaatccaacagcatacaccacttcaggaacggtatatgcggccttt
tttgatgcagcctcaaactgctattcgggggctggagttgctactacggcggttaatgta
accattacggcggcggtacctcaagccaatttgagtgtagccgttgccacgccaatatct
caaactggcgcacaaggagagcagcttacctacactgttacgctgaccaatgcgggtcca
gccaccgcaaccaatgtaatcgtatcggtgcctattccagagcctgcggcctcgttgcta
acggtgtctcccgcttcgggaacatataatggcacaacaaaacaatggacggtgccaagc
ctagcagtgggaaatacaacactgactttcaccttaaaagtaaactaa
DBGET
integrated database retrieval system
