Runella sp. SP2: DTQ70_03420
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Entry
DTQ70_03420 CDS
T05690
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rup
Runella sp. SP2
Pathway
rup00300
Lysine biosynthesis
rup00470
D-Amino acid metabolism
rup01100
Metabolic pathways
rup01110
Biosynthesis of secondary metabolites
rup01120
Microbial metabolism in diverse environments
rup01230
Biosynthesis of amino acids
Module
rup_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DTQ70_03420 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DTQ70_03420 (lysA)
Enzymes [BR:
rup01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DTQ70_03420 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AYQ36166
UniProt:
A0A3G3GXK2
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Position
complement(854555..855790)
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AA seq
411 aa
AA seq
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MQIINHQYQIQNVAVLDIAQQFGTPLYVYDANKIVEKIDELKSAFPNVKLKIKFACKALT
NVSILKLMRQNGVEIDVVSPQELQLALHAGFEGTQVTFTPSGVSFDEIEAAVETGAIINL
DNLNVLEKFGQRYGNRVPCMIRIKPNVAAGGNAKIMTAHEGSKFGIDIRQRDEILAIVEK
YNINVIGLHQHTGSDIKEAEAFVKAADVIFDFAHSFPNLQIIDLGGGFKVAYKEGDYTTN
MPELGAKLSEAFLKLSETLGRELQLWFEPGKFLVSEAGVLLVHANMVKQAPGRTFVGVNS
GLNHLIRPMMYDAYHHIVNVSNPETESKGTYDVVGYICETDTFAKDRELNEVREGDILAL
LNAGAYGFTMSSQYNSRFRPAEVLVYNGQAHVIRERETMDDILRNQVLLAF
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcagattatcaaccaccaataccagattcaaaacgtagctgttcttgacattgcacag
caatttggcacaccgctatatgtgtacgacgccaacaaaatcgttgaaaaaatcgacgag
cttaaaagcgctttcccgaacgtcaagcttaaaattaagtttgcgtgtaaagcgctcacc
aacgtttcgattctgaaacttatgcgccaaaacggggttgaaatcgacgtcgtttctccc
caagagcttcaactcgccctccatgcaggttttgaagggacacaagtcacgtttacaccc
agtggtgtttcgtttgacgaaatcgaggcagccgtcgaaacaggcgctattatcaacctc
gacaacttaaatgtgctcgaaaaatttggccaacgctacggcaatcgtgtgccttgcatg
attcgtatcaaacccaacgttgccgcaggaggaaacgccaaaataatgaccgcccacgaa
ggctctaagtttgggattgatattcgtcaacgcgatgaaattttagcaatcgtcgaaaaa
tacaatatcaacgtcattggtcttcatcaacacacaggctcggacatcaaagaagccgaa
gcctttgtgaaagctgccgatgtgatttttgactttgctcattctttcccaaatcttcaa
atcatagatttaggcggtggttttaaagtagcctacaaagaaggcgattacacgactaat
atgcccgaattaggcgcaaaactgagcgaagccttcttaaaactgagcgaaacactgggt
agagagctccaactttggtttgaacctggaaagtttttggtaagtgaagctggggtgctt
ttggtacatgccaacatggtaaaacaagcccctggacgtactttcgtaggggtaaattcg
ggattaaatcaccttattcgtccaatgatgtacgatgcttatcaccacattgtcaacgta
tcaaaccctgaaacggaaagcaaaggcacgtacgacgtcgtaggatacatttgtgaaaca
gatacctttgccaaagaccgagaactaaacgaagtccgcgaaggggatattctggcactg
ctcaatgcaggtgcgtatgggtttaccatgagtagccagtacaatagccgttttcgccct
gcggaagtactcgtctataacggccaagctcatgtaattcgtgaacgcgaaacgatggac
gacattctaagaaaccaagtgttgcttgcgttttaa
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