Runella sp. SP2: DTQ70_08520
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Entry
DTQ70_08520 CDS
T05690
Name
(GenBank) DUF4962 domain-containing protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
rup
Runella sp. SP2
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DTQ70_08520
Enzymes [BR:
rup01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
DTQ70_08520
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Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_C
DUF4962
DUF4939
Motif
Other DBs
NCBI-ProteinID:
AYQ32218
LinkDB
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Position
complement(2024971..2027358)
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AA seq
795 aa
AA seq
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MKKHIIFWLFNLFCFTTFGQSKKAHPYLFYTPERVKITKERLQTDTLLAKAWQNMLQRTD
KSLEGKGGNLENLTLVYCMTGDTKYAERAKLLLLDWVNRPQWDGMDDRTPRWNSGLGTAR
GCFQTAIAFDGIYNYLTPVERKEITNKIIKLGIEPAIKDWVSEDSRIHTLNSMGHNWWSA
VVFQAGIASMAVLNEEPQAKTWAEEIMRASKEWFAFQGSVLENKPSNFDANGGFYESVSY
ANFAVSEYLTFRLAWTNLFGKASMPYDETLKKTVDWFIHASYPTSKHRMMSLNFGDSNDH
ANGERPAKLMLALGMGNPHYYWYLQQIGNSEGREDMNLATPLGLLYHPIELGIKNDELGK
RNTNSTLSIQNSTLPNPLPTAAIYKDMGWGMLRSSWEKDATMLGVKSGYTWNHAHADAGS
FVLYHNGQYLLIDGGDVSYGLPEYSSYFVRSEAHNVMLFNGKAQDPQDQYHAVKTSGSLH
HLINGGSLKYLMADATGPTSRYFLRNYRHFLWLDKVILVVDDVKTYEAGKFEFLLHYQNE
AKKKGPDLEISQGEASILFRPLYPETLPLGYPHDFPEKMKLEERWGIKDRDVKTKIPYYA
ISPAENSRQTKFWNAILLLDNTNKAVETFVGSSGANGAVGRTNLPVIEKISGDNWQGVRI
TQNGTITEVYLNLLADGRLMHRNANAIINGWETDAYLTAVTFPEKADRSNPDNLTSFFVS
NGSYLRKDEKTFLHSLSKVFMNADYSKKQLKVEVDGQPLMRILLRATEEPSAMIVNDKKR
APAWKDGKITIGLEK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacatatcattttctggcttttcaacttattctgttttacaacttttggccaa
tcaaaaaaggcgcacccttatcttttttatacccctgagcgcgtcaagattaccaaagaa
cgcctccaaaccgatactttattggctaaagcttggcaaaatatgctgcaacgcaccgac
aagtctctcgaagggaaagggggaaatttggaaaacctgactttggtttattgcatgaca
ggcgacaccaaatacgccgaacgagccaaacttttgttgctcgactgggtaaatcgtcct
cagtgggacgggatggacgaccgcactccacggtggaactcaggccttggaactgcccgt
ggctgttttcaaaccgctattgctttcgacggcatttacaattacctcactcctgtcgaa
cgaaaagaaatcactaataaaattatcaaactgggaattgaacctgccataaaagattgg
gtatcagaagatagtcgcattcataccctcaactcgatggggcacaattggtggtcggcg
gtggtatttcaagcagggatagcttccatggctgtactgaacgaagagccccaagccaaa
acctgggctgaggaaataatgcgagcgtccaaagaatggtttgcgtttcagggaagtgtt
ttggagaataaaccctccaatttcgatgccaacggaggcttttacgaaagtgtgagttat
gccaactttgcggtttcagaataccttacgtttcgcttggcctggactaacctttttgga
aaggcatcaatgccttatgatgaaaccctcaaaaagacagtcgattggttcattcatgct
tcttatcccacgtcaaagcaccgaatgatgtcgctcaattttggcgactcaaacgatcat
gccaacggagaacgccccgccaaattgatgttggcactgggaatggggaatcctcattat
tattggtatttacaacaaatcggcaacagtgaagggcgagaagacatgaatcttgctact
ccgttggggctgctttaccatccaatagaattaggaattaagaatgatgaattaggaaaa
aggaatacaaattcgacactcagcattcaaaactcgacacttcctaaccctcttcccacg
gcggctatttacaaagatatgggctggggaatgttgcgctcgtcttgggagaaagatgcg
acgatgttgggggtaaaatcgggttatacttggaatcatgcgcacgccgatgcaggttcg
tttgtgttgtaccacaacggccagtatttactcatcgacggcggtgatgtcagctacggt
ttacctgagtacagttcatattttgtacggagtgaagctcacaacgttatgttgttcaat
ggcaaagcacaagacccacaagaccaatatcatgccgtaaaaacgtcaggtagtctgcat
catttgattaatggtggctcactcaaatacctcatggctgatgcaacagggccgacttcc
cgctattttttgcggaattaccgtcattttttgtggcttgacaaagtgattttggtagta
gatgacgtaaaaacgtacgaagcgggcaagtttgagtttttgttacactaccaaaatgaa
gctaaaaagaaaggccccgacctcgaaattagccaaggagaagcatctattctgtttcgg
ccactctatcctgaaacattgccattagggtatccgcacgattttcccgaaaaaatgaag
ttggaagaacgatggggaatcaaagaccgtgacgtcaaaacgaaaatcccttactatgcc
atttcacccgctgaaaactcacgacaaacaaagttttggaacgctattctattgttagat
aacaccaataaagccgttgaaacttttgttggttcatcgggcgctaatggagccgtagga
cgtaccaatttgcccgtaatcgaaaaaataagcggcgacaactggcagggagtacggatt
acccaaaacggaacgataacggaagtttatctcaatttgctcgccgatggccgcctcatg
caccgcaacgccaatgcgattatcaatggctgggaaaccgacgcctatttaaccgccgtg
actttccccgaaaaagccgaccgctcaaatcctgataacctgacctcgttttttgtcagc
aatggaagttatttgcgcaaagacgaaaaaacctttttgcattcgctttccaaggtgttt
atgaatgctgattattctaagaaacaattgaaagttgaagtggatggccaaccgttgatg
cgtattttattacgagctaccgaggaaccaagcgcaatgattgtcaacgacaaaaaaagg
gcgcccgcatggaaagacggaaagataacaattggtttggaaaagtag
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