Runella sp. SP2: DTQ70_11980
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Entry
DTQ70_11980 CDS
T05690
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
rup
Runella sp. SP2
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rup02000
]
DTQ70_11980
Transporters [BR:
rup02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DTQ70_11980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_12
TPR_7
TPR_2
TPR_1
Motif
Other DBs
NCBI-ProteinID:
AYQ32822
UniProt:
A0A3G3GNH1
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Position
2847583..2849085
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AA seq
500 aa
AA seq
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MKKITSFCILFLGLVQWSCKDDFLVTTDPTRIGTDIFYKTQPQFEQALNGVYGQLQGITS
TAYIFQEFTSDNTTLDFNPLDRGGAAGWEAFEFSTVNPGNGEIANLWNIHYAAMYNINYA
LEKLEPATIDATAKKEIEGQLKFIRAYHYFNLTRYFGDVILATKTLNNPNEAFDLVRTPQ
AEVYKQIEADLKDAVNLLPVKYPATGLGRVTKGAALSLLGKVYLTLKRYPEAVSTLKQVL
PLGYSLYTNYKDNFDPAKKNGVESVFEVQYQGGNDLGEQSNFVYVFAPRLSQGAVTGFAN
TAPSGRNIPTNDMIAAYETGDLRKEISLQLGYTLSGNFVGIPFVNKYRYPHTITGRSDNN
WPVLRYSDVLLMLAESINEATGPDAEALGYLNQVRKRAGLGELTGLTKDTFRTAVLKERR
VELAFENHRWFDLQRTKTPAELAAFMNAYAAKEKANPTVSRGGIAFNALDYVYSDFEYYF
PIPAPQILINSKLTQNPGYQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataacttctttctgtattctctttcttggtttggtgcaatggtcgtgtaaa
gatgattttttggtaaccactgaccctacccgcatcggaacggacattttttacaaaacc
caaccgcagtttgaacaagccctcaacggggtgtacggccaattgcaagggattacaagc
acagcttacatttttcaggaatttacgtcggacaataccacgctcgatttcaaccccctc
gaccgtgggggagctgcgggttgggaagcgtttgagttttcgaccgtcaaccctggcaat
ggtgaaatcgctaacttgtggaatatccactacgcggcaatgtacaacatcaattacgcc
ttggaaaaattggagcctgccactatcgacgctacggcaaaaaaggaaattgaaggtcaa
ctcaagttcatcagagcataccattattttaacctaacccgttactttggggatgttatt
ttggcaactaaaacccttaacaatccaaacgaagcctttgatttggttcgtactccgcag
gctgaagtttacaaacaaattgaagctgacctcaaagacgctgtcaacctccttcctgtt
aaatatccagcaacagggctaggacgtgtaacaaaaggagcggcattgagtttgttgggc
aaagtttatttgacactcaaacgctatccagaggctgtaagtaccttaaaacaagtgttg
ccgttggggtattctctttataccaactacaaagacaactttgaccctgctaagaaaaac
ggcgttgagtccgtctttgaggtgcagtaccaaggaggaaacgacttgggtgagcaaagt
aactttgtgtatgtatttgcgccacgtttgtcgcaaggtgcggtaacaggttttgccaat
acggctccaagtggacgcaacatccctaccaatgacatgattgcggcctacgaaacggga
gacttacgtaaagagatttcgcttcagctgggctataccctcagcggaaacttcgtagga
attccgtttgtcaataaataccgttatccccacaccattactggacgctcggacaataac
tggcccgttttacgctattcggatgtattattgatgctggccgaatctatcaacgaagca
acgggacccgacgctgaggcgctgggctacctcaaccaagttcgtaaacgggcaggattg
ggtgagttaactggcttgacaaaagacactttccgaacagccgttctcaaagagcgccgt
gtggaattggcctttgaaaatcaccgctggtttgacctccaacgcaccaaaacccccgcc
gaattggccgcttttatgaacgcttatgccgccaaagaaaaagccaacccgaccgtatcg
cgtggaggaattgcgttcaacgcgttagactatgtatatagcgattttgagtattatttc
ccgattccagcaccacagattttgatcaactcaaaacttactcaaaaccctggttatcag
tag
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