KEGG   Runella sp. SP2: DTQ70_13305
Entry
DTQ70_13305       CDS       T05690                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rup  Runella sp. SP2
Pathway
rup03030  DNA replication
rup03430  Mismatch repair
rup03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rup00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DTQ70_13305
   03430 Mismatch repair
    DTQ70_13305
   03440 Homologous recombination
    DTQ70_13305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rup03032]
    DTQ70_13305
   03400 DNA repair and recombination proteins [BR:rup03400]
    DTQ70_13305
Enzymes [BR:rup01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DTQ70_13305
DNA replication proteins [BR:rup03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DTQ70_13305
DNA repair and recombination proteins [BR:rup03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DTQ70_13305
SSDB
Motif
Pfam: RNase_T DEDDh_C DNA_pol_A_exo1 RNase_H_2 DnaI_N PipA
Other DBs
NCBI-ProteinID: AYQ33071
UniProt: A0A3G3GPD1
LinkDB
Position
3178698..3179222
AA seq 174 aa
MFAIVDIETTGGAYATSRITEIAIIRHDGTQIIDSYQSLVNPQCWIPGFITQLTGIDNEM
VKDAPTFEEIADEVRRMTLNAAFVAHNASFDYGFVQREFNRLDEYFKRDTLCTVKLSRKI
FPGYKSYSLGNICRDLQIRHVNHHRAMGDASATTLLFEQLLQNDHAGILKDWRP
NT seq 525 nt   +upstreamnt  +downstreamnt
atgtttgccattgttgacattgaaaccacgggcggcgcctatgccacaagccgcatcact
gaaattgcaattattcgccacgatggcacccaaatcatagattcttaccaaagtttggtc
aatcctcaatgttggattcctggttttattacccaactgacgggcatcgacaacgagatg
gtcaaagatgcccctacttttgaagaaatcgccgatgaagtacgtcgaatgaccctcaat
gccgcctttgtagcgcacaatgcttcatttgattatgggtttgtgcaaagggaattcaac
cgtttggatgagtatttcaaacgcgatacgttgtgcacggtgaaactaagtcggaaaatt
tttcctggctataagtcgtacagtttgggcaacatttgccgcgacctccaaatccgccac
gtcaaccatcaccgcgccatgggcgatgcctccgccactaccctattgtttgagcagctt
cttcaaaatgaccacgctggcatcctaaaagactggcgcccgtaa

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