Runella sp. SP2: DTQ70_13575
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Entry
DTQ70_13575 CDS
T05690
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rup
Runella sp. SP2
Pathway
rup03030
DNA replication
rup03430
Mismatch repair
rup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DTQ70_13575 (holA)
03430 Mismatch repair
DTQ70_13575 (holA)
03440 Homologous recombination
DTQ70_13575 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rup03032
]
DTQ70_13575 (holA)
03400 DNA repair and recombination proteins [BR:
rup03400
]
DTQ70_13575 (holA)
Enzymes [BR:
rup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DTQ70_13575 (holA)
DNA replication proteins [BR:
rup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DTQ70_13575 (holA)
DNA repair and recombination proteins [BR:
rup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DTQ70_13575 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF5097
iSTAND
Motif
Other DBs
NCBI-ProteinID:
AYQ33122
UniProt:
A0A3G3GPB5
LinkDB
All DBs
Position
3233336..3234355
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AA seq
339 aa
AA seq
DB search
MVLSPEQALKEIRQKKIQPLYFIHGDEPYYIDLLADALEKAVVPESEKGFNQFVLFGKDA
DVGTILNYARRFPFMSERQLVLVKEAQQSNGLDTKDKSALLDDYATRPLSSTVLALCFQG
NFDMRKALPKTFEKHGVLVQCKKMYDNKLPDWVGEHVRSLGAKISIKAIQMLVENIGNDL
KRITSEIDKILLNLTASEEITAAVVEKYVGISKEYNVFELQKALIQRDVVKSNKIANYLA
ANTKENPLPQVLIILYNFFSKVLVVHGTQDKSEGHLASVLGVSPFFVKDYLSAARQYSLG
HVAKAIKALRQADNASKGIESGSKDEQAIMQELVFTILH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggttctttcccccgaacaagcgcttaaagagatacgccagaagaaaattcaaccgctc
tattttattcacggcgacgaaccttattacattgatttactggccgatgccctcgaaaaa
gccgttgttcctgaatccgaaaaaggatttaatcagtttgtactttttggaaaagatgcc
gatgttggtacgattctcaactacgcgcgtcgctttccgtttatgtcggagcggcaactg
gtattggtcaaagaagcccaacaatccaacggtcttgataccaaagacaaatcggccctt
ttggacgactacgccactcgtccgttgtcatccacggtattggctttgtgttttcagggg
aattttgacatgcgaaaagctttgcccaagacctttgaaaaacacggggttttagtccag
tgcaaaaaaatgtacgacaacaaacttcccgattgggtaggcgagcacgtgcgaagcttg
ggcgcaaaaatcagcatcaaagcgattcagatgttggtggaaaacatcgggaatgacctc
aaacgcatcaccagcgaaatcgacaaaatcttgctcaacctcaccgccagtgaagaaatt
acggccgcagtggtagagaaatacgtaggaattagcaaagaatacaacgtatttgaattg
caaaaggcgcttatccaacgagatgtggtgaagtccaataaaatcgctaattacctcgct
gccaacacgaaagaaaatcctttgccgcaggtgcttatcattttgtacaactttttcagc
aaagtgctcgtcgttcacggaacgcaagacaaatcggaaggacaccttgcttcggtgttg
ggtgtgagtccgttttttgtcaaagattatttatcggcggcgcggcagtattcgttgggg
cacgtggccaaagccatcaaagccttgcgccaagccgacaatgcttctaaaggaatcgaa
tcaggttcaaaagacgaacaagccattatgcaagagcttgtttttacgattttgcactaa
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