Runella sp. SP2: DTQ70_13695
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Entry
DTQ70_13695 CDS
T05690
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
rup
Runella sp. SP2
Pathway
rup02010
ABC transporters
rup02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DTQ70_13695
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DTQ70_13695
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rup01002
]
DTQ70_13695
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rup02000
]
DTQ70_13695
Peptidases and inhibitors [BR:
rup01002
]
Cysteine peptidases
Family C39
DTQ70_13695
Transporters [BR:
rup02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
DTQ70_13695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_29
AAA_25
AAA_30
AAA_21
AAA_16
nSTAND1
AAA_23
BrxC-PglY_N
SbcC_Walker_B
SWT1_3rd
Motif
Other DBs
NCBI-ProteinID:
AYQ33144
LinkDB
All DBs
Position
3254507..3256735
Genome browser
AA seq
742 aa
AA seq
DB search
MRKGIEIKQHDTTDCGAACLASAAAYYKLQMPIARIRQFAHTDTRGTNVVGMIEAANRLG
FQAKGVKGTPESLSKIPKPSIAHVSVPLVSDSDAGREEARGLHYVVIYEVTDKKVTYMDP
AVGKMVKKSLNEFVSMWTGVLVLLLPNEQFQQGNESVTITTRFWQLIRPHQTVMIEALFG
AIIYTILGLGTSIYVQKIVDNVLVEGNRNLLNLMSIGMLLLMVLQLFIGSTKTIFALKTG
QQIDAQLILGYYKHLLKLPQTFFDTMRVGEIISRVNDAVKIRAFINDVALNLIVDIFIVF
FSFGLMFSYDAKLALMMAAIIPLYALTYWIANRINRTTQRKLMENSADLEAQLVESLNNV
ATIKRFGLEEYANLKTENRFVTLLRSVYHTSTRTLYLGNAAALITNIFTILLLWVGSGLV
LDRQLTPGELLSFYALVGYFTGPAAGLIEMNKTLQEALIAADRLFEIMDLERETTENKVP
LTIDMLGDIRFKEVTFRYGSRTTIFEKLNLLIPKGKITAVVGESGSGKSTLLSLLQNLYP
LQAGNIYIGNYDIKHLDNNSLRQMVSVVPQQIDLFAGTVVENIAVGEFEPDMKKLIFYCN
LLGITDFIERLPNGFQTTLGERGANLSGGQRQRLAIARALYRNPHILILDEATSALDSVS
EQYVQRTIQLLRQEGITVILIAHRMSTIKNADKIVVLHEGKLVEEGTHQTLLQSPVGTYR
RLWEQQNGAVMATHLNGVGHYS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagggattgaaataaaacagcacgataccaccgactgcggcgcggcttgcctt
gcctcagcggccgcgtattataaattacagatgccgattgcgcgcatccgtcagtttgcc
cataccgatacccgtggcaccaacgtagtaggtatgattgaagccgctaaccgccttggt
tttcaggccaaaggggttaaaggtacgcccgaaagcctctccaaaatccccaaaccatcg
attgcccacgtgagcgttccgttggtttctgacagcgacgctggtcgtgaggaagcacgg
ggattacactacgtagtcatctacgaagtgaccgacaaaaaagtcacctacatggaccct
gcggtggggaaaatggtcaaaaaatcgctgaacgaatttgtgtcgatgtggacgggcgta
ttggtacttttgttgcccaacgaacagtttcaacaaggcaacgaatcagtaaccatcacg
actcgcttttggcaactgattcgtccgcaccaaaccgtgatgattgaagcgctttttggc
gccattatttataccattttagggttaggcacatcgatttacgtccaaaaaatcgtggat
aacgtgctcgttgaaggcaatcgcaacttgctcaacttgatgagcatcggaatgctttta
ctcatggtactccaactttttattggttctaccaaaacaatttttgccctaaaaacaggc
caacagattgatgcccagttgattttgggctattacaaacacctgctaaaacttcctcaa
acgttttttgatacaatgcgggtgggcgaaatcatttcgcgcgttaatgatgccgtcaaa
atcagggcctttatcaatgatgttgccctcaatctgattgtcgatattttcatcgtcttt
ttttcctttgggttaatgtttagctacgatgccaaattggcgttgatgatggcagctatt
attccactgtacgcccttacatactggattgccaaccggatcaaccgaactacccagcga
aaactcatggaaaacagtgccgatttggaagcgcagcttgtcgaatcgctcaacaacgtg
gctaccatcaagcgttttgggttggaagaatacgccaatctaaagaccgaaaaccgtttt
gtgacgttgcttcgctcggtatatcatacttctacccgcacactctatttgggcaatgcg
gcggcgttgattaccaacattttcaccattttgctcttgtgggtcgggtcggggcttgta
ctcgaccgtcaacttacgcctggagaattgctctcattttatgcccttgttggctatttt
acgggccccgccgcagggctcatcgaaatgaacaaaacgctccaagaagccctcatcgcc
gccgaccgactgtttgaaatcatggatttggaacgagaaaccactgaaaataaagtcccg
ttgacgattgacatgctcggcgacattcgttttaaggaagtgacttttcggtatggttcg
agaacaacgatttttgagaaattaaacctgcttattcccaaaggaaaaattacggccgta
gtgggtgaaagtggcagtggtaaatcgactttgttgtcacttttgcaaaacttgtaccca
ctgcaagctggaaatatttacattggaaattacgacatcaagcacctcgacaacaacagt
ttacgccaaatggtaagcgtcgtaccccaacagattgatttgtttgctggtactgttgtc
gaaaatattgccgttggcgaatttgagccagacatgaaaaagctcattttttactgtaat
ctcctaggaatcaccgattttattgagcggcttcccaatggttttcagacgacattgggc
gaacgcggggccaatttgtcgggtggacagcggcaacggttggccatcgcccgtgcgcta
taccgaaacccacacatcctgattttggacgaagctacctctgccttagattcggtttca
gagcagtatgttcagcgtactattcagctcttgcgtcaagaaggaatcacggttattttg
attgcccaccgcatgagtaccatcaaaaatgccgataaaattgtggtattacacgaagga
aaattagtagaagaaggcacccatcaaacgctattgcagagtccagtcggcacttatcgt
cgtttgtgggaacagcaaaacggtgctgtaatggccactcacctcaacggcgttggccat
tacagctaa
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