Runella sp. SP2: DTQ70_14840
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Entry
DTQ70_14840 CDS
T05690
Name
(GenBank) T9SS C-terminal target domain-containing protein
KO
K20276
large repetitive protein
Organism
rup
Runella sp. SP2
Pathway
rup02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DTQ70_14840
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Por_Secre_tail
Ig_3
ig
Ig_7
Motif
Other DBs
NCBI-ProteinID:
AYQ33354
UniProt:
A0A3G3GRZ7
LinkDB
All DBs
Position
complement(3726469..3731982)
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AA seq
1837 aa
AA seq
DB search
MNYAILGYFVPPSHSTFGTSISVLGLLQNYISSAKNHHSKFHLPIMSSIIHSLNHLSQKH
LKSFLWVAFWFIIGLSSCLSTAEAQTNCPVTTTEVIVPVNDFTGFGYPAYKFYHKDGTNN
NVFYKDETIYSYGIQKNANQNSVCITPNVAAFRTPIMPASFTQICTAANSPVFWISGGDE
CSAPTIRTCQKVGPQQYLYSQVQHFQATATGDFTVAFNNSDGTTVSLTILERYAVYTDCG
NLAGNYVEKGTLNGKKKFVDSDNNELYYDAPNAQWVVSGSMGIAYKAASTADAPPTCDWT
VVNSGCVGGNIKVAYGEYIQPANTFAASVLVNTGCLSHFNGTYYLSGIVDERPVYKRSDG
EELKFDKSSLRWKIGGGVNGQLSNVTTTKTVPTSCWQASTGGSCDLSTINFTLSTNLQVA
NPIVMCVKSGCGTTAGTYTQTGISNERPDLKDDDQNRLYYWGAGDPNHPEGWYIRNSMNV
SLFYNSSTNTAPPTTGWVPFTTDGANCHSSITVSSGECPPCPTPTTTISYAGSPFCSTVT
EGTVTLTGASGGSYSSTTGLTIDAQTGKIDPSKSTAGSYTVTYTVDNDGCLEVITTNVVI
APIVMPTASISVSPTGTVLPGTSLTFTATIGNQGGEPHYQWKKNGTNIPQAWSSTYTSAN
FENGDKITFEVTNNDFCGATKTSNEIVVSIEDPCAKTPTNIVISGLSCGDYNGTYVPAGK
ENGAPKWILQDRNLIRWTGSLWELYDSEGWPVATNSTGSVSNLPCTGWVTDANVGCSGTP
ILSGGCGPLRNLATPSVNIGANPSGSITAGTSVTFTATPANGGTTPSYQWKKNGNDVGTN
SATYTDAALVNGDKITCVMTSGETCTASATATSNEIEMSVTIANPIKICVSDACGVLNGT
YVQTGMTNGKPKLVLDLGGGDAMVLEYSKGIPATGTLQWNINRTTNNLEAHPYIYSNPST
SNTPPLTGWVSNNKFCAVPNFTAGECAPPCVPPTSYNVTGGGPYCSGSGGSVVGLASSQA
GVNYQLKKGGSNIGSVVAGTGSAISFGNQTEAGTYTVEATNTTGNCVATMSGNVVVSVVA
QPVAYNVTGGGSFCQGGSGVVVGLSGSETGVSYQLKKGGVNVGSVVAGTGSAISFGVQSG
GTYTVEATKTGGAAPARIGVGAAAQPSTVTCTQAMTGSAEVKVQTKPTIVLNTLQQTLNE
GNTQVFCDTDANPVNGLQFTVSGLCVVGNPVWRVQVGGGSWSDWSATAPVSQSSNNQPHR
YQAACDASCPVTYTSPIELTINYRASVPQNVSMLVDGVTVAAGETKEVCSLTNSPMAFTA
NCGAGELLLYSVDGGEYSAGVPLGLVDSQFHNYRVRCRKSDGTSSCVESESGVMRLKLVG
IPAAPTVSLSPTTSCNPASIFSGQSSCGSLRTVWYNATTNVALSSLPSTVPSETSSYYAR
CQTENGCVSEKSNVVTFTVTPVNVAPIVTVSQDVVCTGTTVTVSANCPVGSTTSWNTGVS
TPSFEVAFSNVTKQSYWAKCVFEGGCQSAESNRKEVYWQAFVVSLINIGESKSGIKSNDR
AAWSSQFITADGGPELDQSTQQSPTLYYVENVNKMAPRYWTIHADACALGTNGSLTFDML
ATPEMGVIRSFNTHENNAPYFMYANREGWTELYAQNHPAYGFYEDNGSGGNVYDAGLPKG
LYKLSIRYWDMKGWGSIYPSTRKPQGNVLAYQEYWFRIQSKDGVGVGAAREMANGQEAKG
KVQGSDNGKQLTDNGVFATVLPNPVTNILRLKVQDSKGQMVQTSLTDAVGREVLSRHFRP
ETNTHQEEFGVSELPTGIYFLRVKSEAFQSTLKVVKL
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgccattttgggctattttgtcccaccgagccactctacttttggtacatcc
ataagtgtgcttggtctcttacaaaactacatatcttctgcgaaaaatcatcactctaag
tttcatttaccgatcatgagctcaattatccattcactgaatcatttatcccaaaaacat
ttgaagtcgtttttgtgggttgcgttttggtttattatcgggctttcgagctgccttagc
actgctgaggcgcagaccaattgccccgttactactactgaagttattgttcctgtcaat
gattttacggggtttggctaccccgcctacaaattttatcataaagacggcacaaacaac
aatgttttttataaggacgaaaccatttacagctatggcattcagaaaaatgcaaaccaa
aatagtgtctgtattactccaaatgtagcggcgtttcgtacaccaattatgcctgcctct
ttcacgcaaatctgtacagccgccaactcacccgttttctggataagtggaggagatgaa
tgtagtgcgccaacgattagaacatgccaaaaagttggcccacaacaatatttatattca
caggttcagcattttcaggccactgcgacgggagatttcaccgttgcctttaacaacagt
gacggcacaacggtaagtcttacgattttagaacggtatgctgtttataccgactgtggc
aatttggcaggtaattacgttgaaaaggggacgctaaatggcaagaaaaaatttgttgat
tccgacaacaatgaactttactacgatgcccccaatgcccagtgggtggtgagtggttcg
atgggtattgcttacaaggcagcctccactgccgatgcgccccccacgtgcgactggaca
gtagtaaatagtggctgcgttggcggcaatatcaaagtggcttatggggaatacattcaa
cctgctaatacttttgctgcctccgttttggtcaataccggttgcctctcccactttaat
ggtacttattacttatctggtattgttgatgagcggcctgtttataaaaggtctgatggg
gaagaattaaagttcgataagtcaagtttaagatggaaaatcggtgggggagtaaacggt
cagttatctaacgtaacaacgactaaaactgtgcctacttcatgctggcaggctagtact
ggaggttcgtgtgatttaagtacaattaattttacgctcagtaccaacttgcaagttgcc
aatcctattgttatgtgtgtaaagtctggttgtggcactactgcgggcacatacacccaa
accggtatatcgaacgaacgccccgatttgaaagacgatgaccaaaaccgcctttattat
tggggggcaggagaccccaatcaccccgaaggctggtacatccgaaattcaatgaatgta
tcgctgttttataacagttcaacgaacaccgctccacccactacgggctgggtgccgttt
accacagatggcgctaactgccattcatctattaccgtttccagcggcgaatgcccacct
tgccctactccaactactacgatttcctatgcggggtctcctttttgttcaaccgttacg
gaaggcactgtgaccctcacaggcgccagcggcggaagctacagctctacaacgggactt
acgattgatgctcaaacgggaaaaatagacccaagcaaaagtaccgccggcagctacacc
gttacttacaccgttgacaatgacggttgtttggaggtgatcactaccaacgtcgtcatt
gctcctatcgtcatgcccacagcttctatttcggtcagtccaacgggtacagtactgccg
ggcacaagcctcacctttacggctaccatcggcaaccaaggcggtgaacctcactatcag
tggaagaaaaacggaacgaatatcccccaagcgtggagttcgacctatacgtcggccaac
tttgaaaatggcgataaaatcacctttgaagttaccaacaatgacttttgcggagcgacc
aagacgagcaacgaaattgtagtttcgattgaagacccctgtgctaaaacgcccaccaac
attgtgatttcgggtttgtcttgcggtgattacaatggtacttacgttcctgcgggcaaa
gaaaacggtgctcccaagtggattttgcaagatcgtaacctcattcgttggacaggtagc
ttgtgggaattgtacgattccgaaggatggccggttgctaccaatagcacaggttctgtt
tctaacttgccttgtacaggctgggtaacggatgccaatgtaggttgtagtggcacacct
atcctgagcggaggatgcggcccacttcgaaatctggctacaccttcggtgaacattggg
gccaatccaagcggcagtatcacggctggtacaagtgtgacttttaccgctacgcctgcc
aatggcggcaccacaccaagttatcaatggaagaaaaacggaaacgacgtaggcacaaat
agtgctacttataccgatgcggctttggtcaatggagataagattacctgtgtgatgacc
agcggtgagacttgcactgcgtcggcaactgctaccagcaatgagatagaaatgagtgtg
accattgccaatcccataaaaatatgcgtcagcgatgcctgtggggtactgaatggtact
tatgtacaaacaggaatgaccaacggtaaaccaaagttggtgttagacctgggaggggga
gatgccatggtgttggaatattcaaagggtattccagcaacgggtacgctacaatggaat
ataaacagaactaccaataaccttgaagctcatccgtacatctactcaaatccatcgact
tccaatacgccccctttaactgggtgggtatcaaataataaattttgcgccgttccgaac
ttcactgcgggagaatgcgccccaccttgcgtcccccccacttcctacaatgtaacaggc
ggtggcccttattgttcgggcagtggcggttcggtggtaggtttggcgagttcgcaagcg
ggcgtgaactatcagctcaagaaaggtggtagcaatattggcagtgtggtagcaggcact
ggtagtgctatctcgtttggaaatcagacagaagcgggaacttataccgtagaagcaacg
aacacgacggggaattgtgtcgcgacgatgagtggtaatgtagtcgtgagcgtagtagcg
cagcctgtggcctataatgtcacaggtggaggtagtttctgccaaggcggttcaggggta
gttgtaggcttgagcggttcggaaactggggtaagttaccaactgaagaaaggcggtgtc
aatgtaggcagtgtagtagcagggacagggtcagcgatttcatttggcgttcagtctgga
ggtacctacacggtagaagctacgaaaacaggcggtgccgccccagcgcggattggtgtg
ggtgcagcagcgcagcccagtacggtgacgtgtacgcaagccatgacaggtagcgccgaa
gtgaaagtgcagacgaaacctacaatcgtactgaatacgttacaacagacgttgaacgaa
ggcaatacacaagttttctgcgacacagatgcgaatcctgttaacggtttgcagtttaca
gtttcgggtttatgtgtagtgggaaatccagtttggcgagtacaagtgggaggtggttca
tggagcgactggtcggcgacagccccagtttctcaatcctccaataaccaaccgcaccgc
taccaagcggcctgtgatgcgagttgtcccgtgacttatacgtcaccgattgaattgacg
attaattaccgtgcttcggttcctcagaatgtatcgatgttggtggacggggtgacagtg
gcagcgggtgagaccaaagaagtgtgcagcctgaccaacagtccgatggcttttacggcc
aattgtggtgcaggagaattgcttctttactcggtcgatggtggggaatacagcgcaggt
gttcccttgggattggtggacagtcagtttcataactaccgcgtacgctgccgtaaatcg
gacggtacgtcatcgtgtgtggagagtgaatcgggagtgatgcggttaaaattggtaggt
attccagctgcgcctactgtatcattatcgccaacaacaagttgtaaccccgcttcaatt
tttagtgggcaatcatcgtgcgggagtttacggacggtttggtataatgccaccacgaac
gtcgcattatcgagtcttccctcgacggttccaagtgaaacgagttcgtactatgctcgt
tgccagacggaaaacggctgtgtgagtgaaaagagtaatgtagtgacgtttacggtaaca
cctgttaatgtagcgccgatagtgacagtatcgcaagatgtggtgtgtacaggaacaacg
gtgacggtgtcggccaactgcccagtaggaagtacaacaagctggaacacaggggtaagc
acaccaagttttgaggtggcatttagcaacgtaacgaagcagagttactgggcgaagtgc
gtctttgagggcggttgccagagtgcggagagtaatcgtaaagaggtttattggcaggca
tttgtggtgagtttgattaatattggggagagtaaatcggggataaagagcaacgaccgc
gcggcgtggagtagtcagtttatcacggctgatggcggccctgagttagatcaaagcacg
cagcagtctccgacgttgtactacgttgagaatgtgaataaaatggcaccacgttattgg
acgattcatgcggatgcgtgtgccttaggtacgaatggttcgttgacgtttgacatgttg
gctacgcccgagatgggagtgattcgctccttcaacacgcacgagaacaatgcgccgtac
tttatgtatgccaatcgcgagggttggacggagttatatgcgcaaaaccatcctgcgtat
ggattttatgaggacaacggttcaggcggcaacgtttatgacgctggtttaccaaaaggc
ttgtacaaattgagtattcgctattgggacatgaagggttgggggagtatttatccttca
acgcggaagcctcagggcaacgtgttggcgtaccaagaatattggttcagaatccagtcg
aaagatggggtaggcgtgggtgcagcgagagaaatggcaaatgggcaagaggcaaaaggc
aaagtgcaagggtcggataacggaaaacagctaaccgataacggtgtctttgccactgtc
ctccccaatcccgtcaccaacattcttcgtttgaaagttcaagatagcaaggggcaaatg
gtgcagacttcgttgactgatgcagtgggtcgtgaggtgttgagccgccattttagacct
gagacgaacacgcaccaagaggagtttggggtgagtgagttgccaacgggaatatatttc
ttgcgggtgaaatcagaagctttccaaagtactttaaaagttgtgaagctttaa
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