Runella sp. SP2: DTQ70_18215
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Entry
DTQ70_18215 CDS
T05690
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rup
Runella sp. SP2
Pathway
rup03030
DNA replication
rup03430
Mismatch repair
rup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DTQ70_18215
03430 Mismatch repair
DTQ70_18215
03440 Homologous recombination
DTQ70_18215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rup03032
]
DTQ70_18215
03400 DNA repair and recombination proteins [BR:
rup03400
]
DTQ70_18215
Enzymes [BR:
rup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DTQ70_18215
DNA replication proteins [BR:
rup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DTQ70_18215
DNA repair and recombination proteins [BR:
rup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DTQ70_18215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Cas_Csn2
Motif
Other DBs
NCBI-ProteinID:
AYQ33970
LinkDB
All DBs
Position
complement(4568808..4569623)
Genome browser
AA seq
271 aa
AA seq
DB search
MAHNLKLRKPLAFFDLETTGVNIQKDRIIEISVVKALINGEIESKTFLVNPGIPIPLESS
LIHGIYDEDVKDCPTFKNFAKTLAQFLQGCDLAGFNSNRFDVPMLVEEFLRADVEFDIKN
RRLVDAQRIFHMMEPRNLAAAYKFYCGKDLENAHSAHADTMATFEVLCAQVERYAGVKIK
NDKGELYEPIQNDVEALHNLTAAKIVDFANRMAYNSKGEEVINFGKHNGKRVVDVLAQEP
SYYDWMMKGDFTLDTKRKLTEIKMRAAFGKK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcacataatctcaaactcagaaaacctttggcgtttttcgacttagaaacaacgggg
gtaaatattcaaaaagaccgcattattgaaatcagtgtggtgaaagcgctcatcaacggt
gagatagaaagtaagacgtttctggtgaaccctggcatacctattccgctggaatcgagc
ttgattcacgggatttatgacgaagacgtgaaggactgcccaacgtttaaaaactttgcc
aaaacgcttgcgcaatttttgcagggatgtgatttggcaggatttaattccaatcgtttt
gacgtgccgatgttggtggaagagtttttgcgtgccgacgtcgaatttgacattaaaaac
cgtcgattggtggatgcacagcgtatttttcacatgatggaacctcgaaacttagcggca
gcctataagttttattgtggcaaagacctcgaaaatgcccacagtgcgcacgctgatacc
atggctacgtttgaggtgttgtgcgctcaagtggaaagatatgcgggagtaaaaatcaaa
aacgacaagggagagttgtacgagcctattcagaatgatgtagaggcattgcataacttg
acggcagcaaaaattgtagattttgccaatcgaatggcctataactcaaaaggcgaagag
gttatcaactttggaaagcacaatggaaaacgagtagtagatgtgttggcgcaagagcct
agttactacgattggatgatgaaaggtgactttactttagacaccaaacggaaattgacc
gagataaaaatgcgagctgcttttgggaaaaagtag
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