KEGG   Runella sp. SP2: DTQ70_18795
Entry
DTQ70_18795       CDS       T05690                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rup  Runella sp. SP2
Pathway
rup00010  Glycolysis / Gluconeogenesis
rup00020  Citrate cycle (TCA cycle)
rup00260  Glycine, serine and threonine metabolism
rup00280  Valine, leucine and isoleucine degradation
rup00310  Lysine degradation
rup00380  Tryptophan metabolism
rup00620  Pyruvate metabolism
rup00630  Glyoxylate and dicarboxylate metabolism
rup00640  Propanoate metabolism
rup00670  One carbon pool by folate
rup00785  Lipoic acid metabolism
rup01100  Metabolic pathways
rup01110  Biosynthesis of secondary metabolites
rup01120  Microbial metabolism in diverse environments
rup01200  Carbon metabolism
rup01210  2-Oxocarboxylic acid metabolism
rup01240  Biosynthesis of cofactors
Module
rup_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rup_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rup_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rup_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rup00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DTQ70_18795 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DTQ70_18795 (lpdA)
   00620 Pyruvate metabolism
    DTQ70_18795 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DTQ70_18795 (lpdA)
   00640 Propanoate metabolism
    DTQ70_18795 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DTQ70_18795 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DTQ70_18795 (lpdA)
   00310 Lysine degradation
    DTQ70_18795 (lpdA)
   00380 Tryptophan metabolism
    DTQ70_18795 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DTQ70_18795 (lpdA)
   00670 One carbon pool by folate
    DTQ70_18795 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rup04147]
    DTQ70_18795 (lpdA)
Enzymes [BR:rup01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DTQ70_18795 (lpdA)
Exosome [BR:rup04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DTQ70_18795 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 Lys_Orn_oxgnase GIDA HI0933_like Thi4 FAD_binding_3 DAO NAD_binding_8 3HCDH_N AlaDh_PNT_C UDPG_MGDP_dh_N Amino_oxidase
Other DBs
NCBI-ProteinID: AYQ34075
UniProt: A0A3G3GRK4
LinkDB
Position
complement(4693622..4695025)
AA seq 467 aa
MQYDVIVIGSGPGGYICAIRCAQLGLKTAIIEKYKTLGGTCLNVGCIPSKALLDSSEHYY
NAAHSFAEHGIKLENLQVDLAQMIARKSEVVSQVCKGVEFLMKKNKIDVYQGKGSFVDKN
TVKVTKDSGEIEMVTSKNIVIATGSKPSSLPGVTIDKKRIITSTEALQMKEVPKHLIVIG
AGVIGAELGSVYARIGAKVSFVEYASAMIPTMDGTMGKELQRSLKKLGTDFYFSHKVKSV
ENTGDEVVVTAENPKGEIVTFTGDYCLMSVGRRPYTDGLAIENAGLVADNRGKIEVDEHT
LQTKVPNIYAIGDVIRGAMLAHKAEEEGVFVAETIVGQKPHINYSLIPGVVYTWPEVASV
GSTEEELKAKGVPYKSGSFPFKALGRARASMDIDGTVKVLAHKETDEILGAHIIGPRAAD
MIAEAVVAMEYRASAEDISRMSHAHPTYTEAFKEACLAATGNRALNA
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgcaatacgacgttatcgttatcggttcagggccaggaggctatatctgcgccattcgt
tgtgctcaattaggcttgaaaacggccatcatcgaaaaatataaaacgctgggaggaact
tgccttaacgtaggttgtattccttcaaaagcattgcttgactcgtcagaacattactac
aatgcggcgcatagctttgctgaacatggcatcaaactcgaaaacttgcaggtggatttg
gcacagatgattgcccgcaaaagcgaggttgtcagccaagtttgcaaaggagtagagttt
ttgatgaagaaaaataaaatcgacgtttaccaaggaaaaggttctttcgtggataaaaac
acggtaaaagtgaccaaagattcgggtgaaattgagatggtaacgtcaaaaaatatcgtt
attgcaacaggctcaaaaccttcatctttgccaggggtaactatcgataaaaaacgcatt
attacttctaccgaagcccttcaaatgaaagaagttccaaagcacttaatcgtgattgga
gcaggggtaatcggggctgaattaggctctgtgtatgcccgtatcggtgcaaaagtgagc
tttgtagagtatgcttcggctatgattcctaccatggacggaacaatgggtaaagagctt
caacgtagcttgaaaaaactcggtaccgacttctacttcagtcacaaagtgaagtcagtt
gaaaatacaggagacgaagtagtggttacggccgaaaatccaaaaggtgaaatcgtaaca
tttacgggtgactactgtttgatgagcgtaggacgccgcccatataccgatggtttagca
attgaaaatgcaggtttggtcgctgataaccgcggaaaaatcgaagtggacgagcataca
cttcaaaccaaagttcctaacatttatgccatcggcgacgtgattcgcggagcaatgctc
gcccacaaagccgaagaagaaggcgtatttgtagccgaaaccattgttggccaaaaacca
cacatcaactattcgttgattccaggcgttgtttatacatggccagaagtggcaagtgtc
ggaagcacggaagaagaactcaaagccaaaggtgtgccttacaagtcgggttcgtttccg
ttcaaagcgttgggacgtgcccgcgctagtatggacatcgatggtacggtaaaggtactg
gctcacaaagaaacggacgaaattttgggcgctcatatcattggtccacgtgctgccgac
atgattgcggaagccgtagtagcgatggaataccgtgcatcggcggaggacattagccgt
atgtcgcacgcgcacccgacttataccgaagcgtttaaagaagcgtgtttagcagccact
ggcaaccgcgccttgaatgcgtaa

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