Runella sp. SP2: DTQ70_20885
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Entry
DTQ70_20885 CDS
T05690
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rup
Runella sp. SP2
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rup03000
]
DTQ70_20885
Transcription factors [BR:
rup03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DTQ70_20885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
MarR_2
HTH_10
Fe_dep_repress
HTH_IclR
HTH_AraC
HTH_24
HTH_5
HTH_23
HTH_38
HTH_11
HTH_Crp_2
HTH_3
Sigma70_r4
HTH_Tnp_4
MarR
HTH_31
HTH_Tnp_ISL3
UBA_HYPK
HTH_28
DUF7343
HTH_7
Sigma54_DBD
zf-RRPl_C4
NUMOD1
TetR_N
HTH_29
Zn_ribbon_InsA
Motif
Other DBs
NCBI-ProteinID:
AYQ34466
UniProt:
A0A3G3GSV1
LinkDB
All DBs
Position
5187521..5188666
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AA seq
381 aa
AA seq
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MIKCAKCQQIDFVQKSGIVRGKQRYFCKACDYHFTLPEAVENRKNKPRHQVTIVDIANEL
GISKSTVSRALRGHTDIHEGTRKMILDLAQQLEYHPNPLANALLKSRTNIVGILVPEFRH
YFFPTVIMGAQEILSKAGYNVMICHSDESYDTEVANVKALMNSRVDGLLVSVTTQTNNVD
HFRAVLRKEVPLVFFNRVCPELDTPQVIVDDYAGAFQAVEHLVQQGYRRIAHLAGPVSLL
VSRLRMQGYLDALQKHGLPVDNELIIHYDLTEEKARIYANYLLSLPQPPDAIFAINDPTA
IEIMLVAKSRGVKIPQELGIVGFSNDPISAIIEPPLTTVEQPVWEMGRQAARILLEQMEN
PHIETYQLPTKLVVRGSSVNY
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatgcgcgaaatgccaacaaatagattttgttcaaaaatcagggattgtgcgg
gggaagcaacgctacttttgtaaggcgtgcgattatcattttacacttcccgaagccgtt
gaaaatcgcaaaaataaacctcggcaccaagtcacgattgtcgatattgccaatgagtta
gggatttcaaaatcgacggtgtcgcgggcactgcgggggcatacggatatacacgaagga
acgcgcaaaatgattctggatttggcccaacaattggagtaccaccctaatcctttggcc
aatgcacttctgaaaagtcgaacaaacatcgtgggcattttggtacctgaatttcggcat
tatttttttcccaccgtcatcatgggagcgcaggaaattttgtccaaagcagggtataac
gtgatgatttgccattcggatgaatcctacgacaccgaggtggccaatgtcaaagccctg
atgaacagccgcgtggatggtttgctggtgtcggtcactacccaaaccaacaacgtggac
cattttcgggcagtgctgcggaaagaagtgcctttggtgttttttaatcgggtgtgtccc
gaactagacacgccccaagtcattgtggatgattatgcgggggcgtttcaggcagtggag
catttggtacaacaaggctaccgacgcattgcgcatttggcaggccctgtgtcgttgttg
gtcagccgattacggatgcaagggtacttggatgccctgcaaaaacacggtctgcccgtg
gacaatgagttgattattcactacgacttgaccgaagaaaaagcgcggatttatgccaat
tacctacttagccttccgcagccccccgatgcgatttttgccattaatgaccctacggcc
attgaaattatgttagtggccaaaagccgaggcgttaaaattccgcaggaactaggcatt
gtcggttttagcaatgatcccatttcggccatcattgagccacctcttacgaccgtcgaa
cagcccgtttgggagatgggacgacaagccgcgcggattttgttggaacaaatggaaaac
cctcacatcgaaacctaccagttgcctacgaagttggtcgtgcgcgggtcttctgtgaat
tattga
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