Runella sp. SP2: DTQ70_21225
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Entry
DTQ70_21225 CDS
T05690
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
rup
Runella sp. SP2
Pathway
rup03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DTQ70_21225 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rup03400
]
DTQ70_21225 (uvrA)
DNA repair and recombination proteins [BR:
rup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DTQ70_21225 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DTQ70_21225 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
UvrA_inter
AAA_21
UvrA_DNA-bind
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
Viral_helicase1
AAA_15
AAA_33
DnaJ_CXXCXGXG
AAA_22
AAA_23
nSTAND3
NACHT
SLFN-g3_helicase
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AYQ34526
UniProt:
A0A3G3GT06
LinkDB
All DBs
Position
complement(5268996..5271881)
Genome browser
AA seq
961 aa
AA seq
DB search
MNQTTSNPTVSSSDFEGLDPKKFILIKGARVNNLKNIDVAIPRNKLVVVTGVSGSGKSSL
AFDTLFAEGQRMYVESLSSYARQFLGRMEKPEVDYIKGISPAVAIEQKVNTRNPRSTVGT
TTEIYDYLKLLFARIGVTHSPISGEIVRKDTVTDVVNYLMGHEEGTRAMVLAPLIIKENR
TLEQELTILLSKGYTRIVVSDETRSIEELLEEGNVEGALEGTELFILVDRAAIKHEDEDT
LFRLSDSVQTAFFEGEGLCWIKVVGGEKRSFSDKFELDGLKFEEPSVNLFSFNNPYGACK
RCEGFGKVLGLDPELVIPDKNLSVFEGAIAPWRSEKMSEWLAPLLRHGIRFDFPIHRAYK
DLTEDQKALLWTGNSYFEGLTAFFDHLESQTHKVQYRVMLSRYRGRTNCPECRGSRLRQD
ASYVKINGTSITDLVLMPISEVLQFFQNLTLPDFQYGVAKRILIEIENRLEYMNRVGLGY
LTLNRLTNSLSGGEFQRIKLATSLGSALVGSMYILDEPSIGLHPRDTRKLVSVLESLRDM
GNTVIVVEHEEEVMRAADQIIDIGPDAGNLGGEVVWQGSWEEINNDELRGQNDDQVPVSH
TIDFLTGRDQVPVPTFRRKATHWLELTGAKENNLKDVDVKFPLGTLTVVTGVSGSGKSTL
IRKILFPALARVKGEYNEDAGKYANLTGSVERIDNLEMVDQNPIGKSSRSNPVTYIKAYD
YIRQMMSDVPLAKARGYKPSHFSFNVEGGRCETCQGEGQVKIEMQFMADIYLKCEGCGGK
RFKQEVLDVRYQRPDGNSADISDILNMTIDEAIEFFQQEEPKLADRLQPLKDVGLGYIKL
GQSSNTLSGGEAQRVKLAFFLSKSNPNQGRSLFIFDEPTTGLHFHDIQKLLKSINALVNQ
GDTVIVIEHNVEVIKSADWIIDLGPEGGDKGGYITFAGTPESMLALENNYTAEFLKLKMN
P
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacgacaagtaatccgactgtatcttcttctgattttgaaggactagacccc
aaaaaatttatcctcatcaaaggagcgcgagtaaataatctcaaaaatattgatgtggcc
attccacgaaacaaactcgttgttgtaacgggtgtgtcggggtcgggcaaatcatcgttg
gcgttcgatacactttttgccgaaggccagcgcatgtacgtcgaaagcttgagcagttat
gcccgtcagtttttggggagaatggaaaagcccgaagtggattacatcaagggaatctcg
cctgcggtagccatcgaacagaaagtcaatacccgaaatccacgctcaacggtggggacg
accactgaaatctacgattatttgaaattactttttgcccgaattggggtaactcactcg
cctatttcgggagaaattgtgcgcaaagacacggtgaccgacgtggtcaattacctcatg
ggccacgaggaagggacgcgggcaatggttttggcgccgcttatcatcaaagaaaatcgt
acgctcgaacaagaattaaccattctactttccaaaggctatacgcgaatcgtggtaagt
gacgaaacacgttcgattgaggaactactggaagaaggcaacgttgaaggagctttggag
ggaacggagctatttattttggtggaccgagcggccattaagcacgaggacgaagatacg
cttttccgtctttcggattcggtacaaacggccttttttgaaggagaagggttgtgctgg
ataaaagtggtcggcggagaaaaacgttcgttttctgataagtttgaattagatgggcta
aaatttgaagaacctagcgttaatcttttcagctttaataacccttacggcgcttgcaaa
cgctgcgaaggttttggaaaagtactggggctagaccccgaactggtgattcccgataaa
aatctttcggtatttgagggagcaattgccccttggcgttccgaaaaaatgagcgaatgg
ttagcgcctttgcttcgtcacggtatccgttttgatttccccatccatcgtgcttataaa
gatttaaccgaagaccagaaagcgttactttggacgggaaatagctattttgagggtcta
acggccttttttgaccatttagaatcgcagacgcacaaagtacaataccgtgtgatgttg
tcgcgataccgaggtcgaaccaactgccccgaatgtcgaggctctcgtttgcgtcaggat
gcgagttacgtaaaaataaatggtacttccattactgacttggttttgatgccaatttcg
gaggtgttacaatttttccaaaacctcactttacccgattttcaatacggcgtggccaaa
cgaattttgattgaaattgaaaaccgtttggaatacatgaaccgcgtggggctaggttat
ttgacgctcaaccgtcttactaattcgctttcaggcggagaatttcaacggattaagttg
gcaacgtcattgggtagtgccttggtaggttcaatgtacattttggacgaaccaagcatt
ggccttcacccgcgtgatacccgaaagttagtaagtgtgttggagtcactgcgcgacatg
ggcaataccgtaattgtggttgaacacgaggaagaagtcatgcgcgccgccgatcaaatc
atcgacatcggcccagatgcaggaaatttgggtggagaagtggtttggcaggggagttgg
gaggaaattaataatgacgaattacgaggacagaacgacgaccaagtacctgtatcccac
accatcgatttcctcacaggccgcgaccaagtaccagttcccaccttccgtcggaaagcg
acgcattggttggagttgacgggagccaaagaaaataacctgaaagacgtggacgtgaaa
tttccgttggggacgctgacggtcgtgacgggggtgtcgggttcgggaaaatcgacgctg
attcggaagattttattccccgccttggctcgcgtaaaaggagaatacaacgaagatgcg
ggcaaatacgccaacctgacggggagcgttgagcgaattgataacttagaaatggtggat
caaaatcccatcggaaaatcgtctcgttccaatcccgttacgtacatcaaagcttatgat
tacattcgccaaatgatgagcgatgtgcccttggccaaagccagggggtacaaaccttct
catttctctttcaacgtcgagggtgggcgctgcgaaacctgccaaggtgaaggtcaagta
aaaattgaaatgcagttcatggccgatatttacctcaaatgtgaaggttgtggtggaaag
cgtttcaaacaagaagtgctggatgtccgctatcaacgtcccgatggaaactcagctgat
atttcggatattttaaatatgacgattgacgaagccattgagttcttccagcaagaagaa
cctaaattggccgatcgtcttcaaccattgaaagacgtggggctgggatacatcaagctg
gggcaatcttctaataccctttcaggaggtgaagcccaacgggtaaaactggccttcttc
ttgagcaaatcgaaccctaatcaagggcgttcgctctttatttttgacgaaccgaccacg
gggctccattttcacgacattcaaaaactgttaaaatccatcaatgcgctggtcaatcag
ggagataccgtgattgttattgagcacaacgtcgaagtcataaaatcggccgattggatc
attgatttggggccagaagggggagacaagggcggctacattacgtttgcgggtacgcct
gagagtatgttggcgctagaaaataactacacggctgagtttttgaaactaaaaatgaac
ccataa
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