KEGG   Runella sp. SP2: DTQ70_21280
Entry
DTQ70_21280       CDS       T05690                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rup  Runella sp. SP2
Pathway
rup03030  DNA replication
rup03410  Base excision repair
rup03420  Nucleotide excision repair
rup03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rup00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DTQ70_21280
   03410 Base excision repair
    DTQ70_21280
   03420 Nucleotide excision repair
    DTQ70_21280
   03440 Homologous recombination
    DTQ70_21280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rup03032]
    DTQ70_21280
   03400 DNA repair and recombination proteins [BR:rup03400]
    DTQ70_21280
Enzymes [BR:rup01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DTQ70_21280
DNA replication proteins [BR:rup03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DTQ70_21280
DNA repair and recombination proteins [BR:rup03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DTQ70_21280
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DTQ70_21280
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2 HHH_5 pXO2-72 RNase_H_2 RecR_HhH HHH DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AYQ34536
UniProt: A0A3G3GT19
LinkDB
Position
complement(5282524..5285361)
AA seq 945 aa
MKPEKKLFLLDAFALIYRAHFAFVKNPRISSKGLNTSAIFGFANTLLEVLKDEKPTHLGV
AFDTPKPTFRHVQFEAYKAQRQEQPEDITTAVPYVKQLLKAMCIPILEMEGYEADDVVGT
LAKKAAREGFEVFMMTPDKDYGQLVEEHVYLYKPAISGKGVEIMGPKEVCERWGISDISQ
VVDMLGLQGDASDNIPGIPGVGEKTAQKLVAEFGSIENLIVNTDKLAGKLKEKVIEGKDL
AVLSKQLATIDINVPIAFEEEDLRMCEPNRELLSSLLDELEFKTLKKRLLGETEAPVAIP
AANKTGQLNLFGEAPTAAPSVSKQSEVTSVSTGTESETSNERRTVATTAHRYHLVNTPEL
RQSLAYYLSLQESFCFDTETTSVDAIDAELVGLAFAYRDGEAFYVPVPADRAEAQAIVED
FREVLENEKIEKIAQNLKYDMLILQNYGVEVRGPLYDTMLAHYLIEPDKRHNMDALANAY
LNYEPVAIEALIGKKGPKQLTMRDVAIEKLVEYAAEDADITLQLKHKLQPLLVENQAEKL
FKGVEVPLVPVLAAMEREGIKVDTNVLSEMSGVLEIDMKQVEQEIFGLAGEEFNIGSPKQ
LGVVLFEKMKLVKNPKKTATGQYATGEDILSDLESEHEIARKILDYRELQKLKSTYVDAL
PQLINPSTGRIHTSFNQAVAATGRLSSTNPNLQNIPIRTPRGREIRKAFIPRNEDYVILS
ADYSQIELRIMAAFSQDATMLEAFNKGIDIHASTASKVFDVALEEVTSDMRRKAKMVNFG
IIYGISAFGLAQRLGIARGEASEIIKAYFQEFPAVKSYMDMVINKAREQKYVETILGRRR
YLADIDSQNQTTRGFAERNAINAPIQGSAADMIKIAMINIHDFLKREKLQSRMLLQVHDE
LVFDAHRDEIELLSHHVNELMVNAIPLPVKMETGIGKGLNWLEAH
NT seq 2838 nt   +upstreamnt  +downstreamnt
atgaaacccgaaaaaaaattatttctcttagacgcatttgccctcatttaccgtgcccac
tttgcgtttgttaaaaatcctcgaatttcttccaaagggttaaacaccagtgctattttt
ggttttgccaataccttattggaagtattaaaagacgaaaaacctacccaccttggagtg
gcttttgatacaccgaagcctacttttcggcatgtgcaatttgaagcctacaaagcacag
cgtcaagaacaacccgaggacattacaacggcggttccgtacgtaaaacagctactcaag
gcaatgtgtattcctatcttggaaatggaaggatatgaagccgacgacgtggtagggacg
cttgccaaaaaagccgcccgcgaagggtttgaagtgtttatgatgacccccgacaaggac
tacgggcagttggtcgaagagcatgtatatctttacaaaccagccatatcgggaaaagga
gtggagattatggggccaaaagaagtatgtgagcgttggggaatcagtgatattagtcag
gtggtggacatgttgggactgcaaggtgatgcgtccgataacattcctggcattccaggg
gttggagaaaaaacggcgcaaaaattggtcgctgagtttggttcgattgaaaacctgatt
gtcaataccgataagctcgcaggcaaactcaaagagaaagtcattgagggaaaagacttg
gcggtgttgtcgaagcaactggcgacgattgacattaacgtgccgattgcctttgaagag
gaagatttgcgcatgtgtgagcccaaccgcgagctactttcgtcgttgttggatgaacta
gagtttaaaacccttaaaaaacgccttttgggcgaaacggaagcccccgttgctattcct
gcggccaataaaacgggccaattgaacctgtttggtgaagccccaacggcagctccttcg
gtgagtaaacaaagcgaagtgacttcggtaagcacaggtaccgaatcagaaacgagcaat
gagcgccgtacggtggctaccacggctcaccgctatcatttggtgaatacccctgagctt
cgtcaatcgctggcgtattacttgagtttgcaagaatctttttgttttgatactgaaacc
acgtcggtggatgccattgatgctgaattggtgggtttggcatttgcttaccgcgacggc
gaggcgttttacgtacccgtgccagccgaccgtgccgaagcacaagctatcgtggaagat
tttcgagaagtgcttgaaaacgaaaagattgaaaagatagcgcagaacctcaaatacgac
atgttgattctgcaaaattacggggtagaagtgcgcgggccgttgtacgataccatgttg
gcgcattatcttatcgaacccgacaagcgtcataacatggatgcgctggccaatgcctat
ctcaactacgaacccgtggcgattgaggcgcttattggtaaaaaaggccccaaacaattg
accatgcgggatgtggctattgagaaattggtagaatatgccgccgaggatgccgacatt
accctccaactcaagcataaactacaaccacttttggtcgaaaaccaagccgagaaatta
ttcaaaggcgtagaagtgccgttagtgcccgttttggcagcgatggaacgtgaggggata
aaagttgataccaacgttttatccgaaatgtcgggcgtgctggaaatcgacatgaagcaa
gtcgagcaagaaatttttggactggcgggagaggagtttaacatcggttcaccgaagcag
ttgggagtggttttgtttgaaaaaatgaagttggttaaaaaccctaaaaaaacagcgacg
ggacaatacgctacgggagaagatattttgtcggatttggaatcggaacacgaaattgcg
cgtaagattctggattaccgcgagttgcaaaaactaaaatcgacctacgtggatgcgttg
ccacagcttatcaacccatcaacgggacgaattcacacgtcgttcaatcaggccgtggca
gcgacggggcgtttgagcagtaccaatcctaaccttcagaacattccgattcgtacgcct
cgtggacgagagattcggaaagcgttcatccctagaaatgaagattatgtgattttgtcg
gccgactactcgcaaatcgaactccgaatcatggccgctttcagtcaggatgccaccatg
ctcgaagccttcaataaaggtattgatattcacgctagtaccgccagtaaagtatttgac
gtagccctcgaagaagtaacgtcggatatgcgtcgaaaagccaaaatggtcaattttggt
atcatttatggtatttcggcctttggcttagcccaacgcttggggattgcgcggggagaa
gcaagtgaaatcatcaaagcctatttccaagaatttcctgctgtaaaaagctacatggac
atggtgattaacaaagcccgtgaacaaaaatacgttgaaacaattttaggacgtcggcgt
tatttggctgatattgattctcaaaaccaaacgacgcgtggttttgccgaacgaaacgcc
atcaacgccccgattcaaggctcggcggcggatatgattaagatagcgatgattaatatc
cacgattttctgaaacgcgaaaaactacagtcacgtatgcttttgcaggtacatgacgaa
ttggtgtttgacgcgcaccgcgatgaaatcgaattgttgagccaccacgtaaatgagttg
atggtgaatgccattccgttgcccgtaaaaatggaaacgggaattggaaaagggctcaat
tggttggaagcgcactag

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