Runella sp. SP2: DTQ70_21280
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Entry
DTQ70_21280 CDS
T05690
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rup
Runella sp. SP2
Pathway
rup03030
DNA replication
rup03410
Base excision repair
rup03420
Nucleotide excision repair
rup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DTQ70_21280
03410 Base excision repair
DTQ70_21280
03420 Nucleotide excision repair
DTQ70_21280
03440 Homologous recombination
DTQ70_21280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rup03032
]
DTQ70_21280
03400 DNA repair and recombination proteins [BR:
rup03400
]
DTQ70_21280
Enzymes [BR:
rup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DTQ70_21280
DNA replication proteins [BR:
rup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DTQ70_21280
DNA repair and recombination proteins [BR:
rup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DTQ70_21280
NER (nucleotide excision repair)
GGR (global genome repair) factors
DTQ70_21280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
HHH_5
pXO2-72
RNase_H_2
RecR_HhH
HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AYQ34536
UniProt:
A0A3G3GT19
LinkDB
All DBs
Position
complement(5282524..5285361)
Genome browser
AA seq
945 aa
AA seq
DB search
MKPEKKLFLLDAFALIYRAHFAFVKNPRISSKGLNTSAIFGFANTLLEVLKDEKPTHLGV
AFDTPKPTFRHVQFEAYKAQRQEQPEDITTAVPYVKQLLKAMCIPILEMEGYEADDVVGT
LAKKAAREGFEVFMMTPDKDYGQLVEEHVYLYKPAISGKGVEIMGPKEVCERWGISDISQ
VVDMLGLQGDASDNIPGIPGVGEKTAQKLVAEFGSIENLIVNTDKLAGKLKEKVIEGKDL
AVLSKQLATIDINVPIAFEEEDLRMCEPNRELLSSLLDELEFKTLKKRLLGETEAPVAIP
AANKTGQLNLFGEAPTAAPSVSKQSEVTSVSTGTESETSNERRTVATTAHRYHLVNTPEL
RQSLAYYLSLQESFCFDTETTSVDAIDAELVGLAFAYRDGEAFYVPVPADRAEAQAIVED
FREVLENEKIEKIAQNLKYDMLILQNYGVEVRGPLYDTMLAHYLIEPDKRHNMDALANAY
LNYEPVAIEALIGKKGPKQLTMRDVAIEKLVEYAAEDADITLQLKHKLQPLLVENQAEKL
FKGVEVPLVPVLAAMEREGIKVDTNVLSEMSGVLEIDMKQVEQEIFGLAGEEFNIGSPKQ
LGVVLFEKMKLVKNPKKTATGQYATGEDILSDLESEHEIARKILDYRELQKLKSTYVDAL
PQLINPSTGRIHTSFNQAVAATGRLSSTNPNLQNIPIRTPRGREIRKAFIPRNEDYVILS
ADYSQIELRIMAAFSQDATMLEAFNKGIDIHASTASKVFDVALEEVTSDMRRKAKMVNFG
IIYGISAFGLAQRLGIARGEASEIIKAYFQEFPAVKSYMDMVINKAREQKYVETILGRRR
YLADIDSQNQTTRGFAERNAINAPIQGSAADMIKIAMINIHDFLKREKLQSRMLLQVHDE
LVFDAHRDEIELLSHHVNELMVNAIPLPVKMETGIGKGLNWLEAH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgaaaaaaaattatttctcttagacgcatttgccctcatttaccgtgcccac
tttgcgtttgttaaaaatcctcgaatttcttccaaagggttaaacaccagtgctattttt
ggttttgccaataccttattggaagtattaaaagacgaaaaacctacccaccttggagtg
gcttttgatacaccgaagcctacttttcggcatgtgcaatttgaagcctacaaagcacag
cgtcaagaacaacccgaggacattacaacggcggttccgtacgtaaaacagctactcaag
gcaatgtgtattcctatcttggaaatggaaggatatgaagccgacgacgtggtagggacg
cttgccaaaaaagccgcccgcgaagggtttgaagtgtttatgatgacccccgacaaggac
tacgggcagttggtcgaagagcatgtatatctttacaaaccagccatatcgggaaaagga
gtggagattatggggccaaaagaagtatgtgagcgttggggaatcagtgatattagtcag
gtggtggacatgttgggactgcaaggtgatgcgtccgataacattcctggcattccaggg
gttggagaaaaaacggcgcaaaaattggtcgctgagtttggttcgattgaaaacctgatt
gtcaataccgataagctcgcaggcaaactcaaagagaaagtcattgagggaaaagacttg
gcggtgttgtcgaagcaactggcgacgattgacattaacgtgccgattgcctttgaagag
gaagatttgcgcatgtgtgagcccaaccgcgagctactttcgtcgttgttggatgaacta
gagtttaaaacccttaaaaaacgccttttgggcgaaacggaagcccccgttgctattcct
gcggccaataaaacgggccaattgaacctgtttggtgaagccccaacggcagctccttcg
gtgagtaaacaaagcgaagtgacttcggtaagcacaggtaccgaatcagaaacgagcaat
gagcgccgtacggtggctaccacggctcaccgctatcatttggtgaatacccctgagctt
cgtcaatcgctggcgtattacttgagtttgcaagaatctttttgttttgatactgaaacc
acgtcggtggatgccattgatgctgaattggtgggtttggcatttgcttaccgcgacggc
gaggcgttttacgtacccgtgccagccgaccgtgccgaagcacaagctatcgtggaagat
tttcgagaagtgcttgaaaacgaaaagattgaaaagatagcgcagaacctcaaatacgac
atgttgattctgcaaaattacggggtagaagtgcgcgggccgttgtacgataccatgttg
gcgcattatcttatcgaacccgacaagcgtcataacatggatgcgctggccaatgcctat
ctcaactacgaacccgtggcgattgaggcgcttattggtaaaaaaggccccaaacaattg
accatgcgggatgtggctattgagaaattggtagaatatgccgccgaggatgccgacatt
accctccaactcaagcataaactacaaccacttttggtcgaaaaccaagccgagaaatta
ttcaaaggcgtagaagtgccgttagtgcccgttttggcagcgatggaacgtgaggggata
aaagttgataccaacgttttatccgaaatgtcgggcgtgctggaaatcgacatgaagcaa
gtcgagcaagaaatttttggactggcgggagaggagtttaacatcggttcaccgaagcag
ttgggagtggttttgtttgaaaaaatgaagttggttaaaaaccctaaaaaaacagcgacg
ggacaatacgctacgggagaagatattttgtcggatttggaatcggaacacgaaattgcg
cgtaagattctggattaccgcgagttgcaaaaactaaaatcgacctacgtggatgcgttg
ccacagcttatcaacccatcaacgggacgaattcacacgtcgttcaatcaggccgtggca
gcgacggggcgtttgagcagtaccaatcctaaccttcagaacattccgattcgtacgcct
cgtggacgagagattcggaaagcgttcatccctagaaatgaagattatgtgattttgtcg
gccgactactcgcaaatcgaactccgaatcatggccgctttcagtcaggatgccaccatg
ctcgaagccttcaataaaggtattgatattcacgctagtaccgccagtaaagtatttgac
gtagccctcgaagaagtaacgtcggatatgcgtcgaaaagccaaaatggtcaattttggt
atcatttatggtatttcggcctttggcttagcccaacgcttggggattgcgcggggagaa
gcaagtgaaatcatcaaagcctatttccaagaatttcctgctgtaaaaagctacatggac
atggtgattaacaaagcccgtgaacaaaaatacgttgaaacaattttaggacgtcggcgt
tatttggctgatattgattctcaaaaccaaacgacgcgtggttttgccgaacgaaacgcc
atcaacgccccgattcaaggctcggcggcggatatgattaagatagcgatgattaatatc
cacgattttctgaaacgcgaaaaactacagtcacgtatgcttttgcaggtacatgacgaa
ttggtgtttgacgcgcaccgcgatgaaatcgaattgttgagccaccacgtaaatgagttg
atggtgaatgccattccgttgcccgtaaaaatggaaacgggaattggaaaagggctcaat
tggttggaagcgcactag
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