KEGG   Runella sp. SP2: DTQ70_21990
Entry
DTQ70_21990       CDS       T05690                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
rup  Runella sp. SP2
Brite
KEGG Orthology (KO) [BR:rup00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rup03000]
    DTQ70_21990
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rup02048]
    DTQ70_21990
Transcription factors [BR:rup03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    DTQ70_21990
Prokaryotic defense system [BR:rup02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    DTQ70_21990
SSDB
Motif
Pfam: HTH_3 HTH_31 HTH_37 HTH_Crp_2 DUF6576 HTH_19 FAD-SLDH HTH_26
Other DBs
NCBI-ProteinID: AYQ34674
UniProt: A0A3G3GW29
LinkDB
Position
5455988..5456383
AA seq 131 aa
MTSPLKTEAEYKQVMAEIETFLQKATHNEGFTSLSPEETERLRNLSLQAEAYEDAIPIMP
LQIPTPQTLSDMLSLKMFQLKLKQKDLAALLDITPTRLSEVMTGKRKVNMDLAKRLYQKL
AIDPAFILEHA
NT seq 396 nt   +upstreamnt  +downstreamnt
atgacttccccactaaaaaccgaagctgaatacaagcaagtaatggctgaaattgagacg
tttttacaaaaagctactcataatgaaggttttacaagcctttctcctgaagaaacagaa
cgtctccgaaatctatctttacaagcagaagcttacgaagacgctatcccaatcatgcct
ttacaaattcctactcctcaaacactttctgacatgctgagtttaaaaatgtttcagtta
aaattgaaacaaaaagacttagcagcactacttgacatcacgcctacccgactctcggaa
gtgatgacgggcaagcgtaaggtcaacatggatttagctaaacgactttatcaaaaatta
gccatcgaccctgcgtttattttagaacatgcttaa

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