Runella sp. SP2: DTQ70_22415
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Entry
DTQ70_22415 CDS
T05690
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rup
Runella sp. SP2
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rup02000
]
DTQ70_22415
Transporters [BR:
rup02000
]
Other transporters
Pores ion channels [TC:
1
]
DTQ70_22415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PD40
OmpA
Tricorn_N
CarboxypepD_reg
DUF748
Fn3_arc
Motif
Other DBs
NCBI-ProteinID:
AYQ34754
LinkDB
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Position
5548536..5550092
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AA seq
518 aa
AA seq
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MKSTLIAFSCFIFPTAFVFAQLKVENLGNAINSEYNEINPVISPDGKTLYFGRVSHPQNA
HGQEGSQDIWFSEWQNSQWSLAKRMTPPLNKEEYNCAYSVTPDGNTLLIMGAYDRGAYET
RGFSFSKRTVNGWSAPSKLNIPGLEGMSKGEYMCGFLSNDGKTLLMAFSEKKRSTKDDLY
VSFLQKNGTWTKPQSLGVEVNTDDFTETTPFLASDGATIYFSSDRPGGQGSNDIYYTKRI
DKTWKRWSKPVNLGQAINTDGYDAYYTIAAAGDYAYMVSKKNTLGKGDIVRIKIKSDEPS
AAPIVPAPDPVALVSGKVVDTKTGKPIDARIIYENLADGTEVGTAQTDPRTGEYKIVLPK
GVKYGVRAVAKDFIAEAQSIDLTNMKGGFQEVNGTNLTLVPIEINAVGVLNNLFFDTGKA
ALRPESNAELDRMVLTFNENPGLVMEIGGHTDNVGTDAANLKLSQERADSVREYFIGKGI
EPDRVQSKGYGEAKPKATNDTEEGRQINRRVEFKILKK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaactcttattgcttttagctgttttatttttccaactgcgtttgtttttgcc
cagcttaaagtcgaaaacctaggcaatgccatcaactccgaatacaacgaaatcaacccc
gtcatttctcccgacggcaaaaccctctattttgggcgggtaagccacccccaaaacgcc
cacggccaagaaggaagccaagacatttggttttcggaatggcaaaatagccaatggagt
ttggccaaacgaatgactcctccgctcaacaaagaggaatacaactgtgcctacagtgtc
acccccgatggcaataccttgctgattatgggcgcttacgaccgtggtgcctacgaaacg
cgcggattttcgtttagtaagcgtactgtcaatggctggtcagcgcccagtaaattgaat
attccaggcttggaaggaatgagcaaaggcgaatacatgtgcggttttttatcgaacgat
ggaaaaacgctactcatggcttttagcgagaaaaaacgtagtaccaaagacgatttgtac
gtgagttttctccaaaaaaatggcacttggaccaaaccccaaagcctcggcgtagaagta
aataccgacgattttacggaaacaacaccgtttcttgcctctgatggcgccaccatttat
ttttcgagcgaccgaccagggggacaaggtagcaacgatatttattacaccaaacgcatt
gataaaacgtggaagcggtggtcaaagcctgttaatctaggccaagctatcaacaccgac
ggctacgatgcctattataccattgcagccgcaggtgattatgcctacatggtttccaag
aaaaacaccctcggcaaaggagacatcgttcgcattaaaatcaagtcggatgagccttca
gccgcgcctatcgtacctgcacctgaccctgtagcattggtcagtggaaaggttgttgat
accaaaacaggcaaaccaattgacgcccgcatcatttacgaaaacttggccgacggtacg
gaagtaggaactgcccaaaccgacccccgcacgggagaatataaaatcgtattgcccaag
ggtgtgaagtatggcgtacgggcagtggccaaagactttatcgctgaagctcagagcatc
gaccttaccaacatgaaaggtgggtttcaggaagtaaacggtactaacctcacgcttgta
ccgattgaaatcaatgcggttggggtactaaacaacctctttttcgatactggtaaagcc
gccttacgtcccgaatctaatgccgagcttgaccgtatggtgcttactttcaacgaaaac
ccaggcttggtgatggaaattggaggtcacacagacaacgttggtacggatgccgccaac
ttaaaactatcgcaagaacgtgcagattctgtacgggaatattttattggaaagggtatt
gaacccgaccgcgtgcaaagtaaaggatacggagaagccaaacccaaagccaccaatgac
accgaagaaggacgccaaatcaaccgtcgggtagagttcaagattttgaagaaataa
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