KEGG   Runella sp. SP2: DTQ70_24455
Entry
DTQ70_24455       CDS       T05690                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rup  Runella sp. SP2
Pathway
rup00061  Fatty acid biosynthesis
rup00071  Fatty acid degradation
rup01100  Metabolic pathways
rup01212  Fatty acid metabolism
rup02024  Quorum sensing
rup04146  Peroxisome
Module
rup_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rup00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    DTQ70_24455
   00071 Fatty acid degradation
    DTQ70_24455
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    DTQ70_24455
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DTQ70_24455
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rup01004]
    DTQ70_24455
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rup04147]
    DTQ70_24455
Enzymes [BR:rup01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     DTQ70_24455
Lipid biosynthesis proteins [BR:rup01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   DTQ70_24455
Exosome [BR:rup04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   DTQ70_24455
  Exosomal proteins of breast cancer cells
   DTQ70_24455
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: AYQ35119
LinkDB
Position
complement(6075653..6077329)
AA seq 558 aa
MKATNSPTPITTFVDNLYHWEKERPHQVYLRQPFGDSFRDYTWKEVGDQVRRVSAYLRSL
NLPPQSNIGLVSKNCAEWIIADLAIMMTGHVSVPFYATLTADQLQQVLTHSGCSVLFVGK
LDDWSGMKKGVSSAIKCISFPTYNPDSEHIQWNNILANHAPISDNPTPQPNELFSIIYTS
GTTGNPKGVMVTHRAVSEAVGRTKDILRYDVPNPRFFSYLPLCHIAERNIIEATSLGTGG
TVYFAESLDTFAKNLAAASPTHFLAVPRIWTKFQLGILAKMPQKKLDMLLKIPILSGIVK
KKIRQGLGLNEAQLVLTGAAPMPISLIRWFRRLGVTIQEAYGMTENLGAVCMMPHDNPKD
GSVGKIYPGMEVVIAEGTGEILTRSPWNMLGYYREPSLTADTIDSDGWIHTGDVGEVDED
GYLKITGRVKEMYKTSKGEYVAPSQIEFGFADNKMIEQICVVGQNLPQPIALVVLSEMAQ
KFDKDTINQSLNSTLSDLNPRLKTYERVQKIVIIKGTWTVDNNMLTPTMKTKRNVIEKNY
APMMEPWYETKESIIWES
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgaaagccaccaactcaccaacgccaatcactacctttgttgacaatttataccattgg
gaaaaagaacgtcctcatcaagtctatcttcgtcagccctttggggatagtttcagagat
tatacatggaaagaagtcggtgaccaagtgcggcgggtttcggcctacctgcgctcgctc
aacctaccgccacaaagcaacatcgggctggtttccaaaaactgtgccgaatggattatt
gccgatttggccatcatgatgacaggccacgtttcggtacctttttatgctaccctcacc
gccgaccagcttcagcaagtgctcacccacagtggttgctcggttttgtttgtaggtaag
ctcgacgattggtcaggaatgaaaaaaggagtttcttcagcgattaaatgtatatcgttt
cccacttataaccctgattctgaacacattcagtggaataacattttggccaaccacgcc
cctatttccgacaatcccacgcctcaacctaatgaattgttttcaatcatttatacttcg
gggactacaggcaaccccaaaggagtgatggtgacgcaccgagcggtatcagaggccgtt
ggccgaactaaggacattcttcggtatgatgtacctaatcctcgttttttttcctattta
cctttgtgtcacattgcagagcgaaacattattgaagcgacaagtttgggtacaggcgga
acggtttattttgccgaatcgcttgatacttttgccaaaaacttagcagcggcgagcccg
acccattttttggctgtacctcgtatttggaccaaatttcagttgggtattttggccaaa
atgccgcaaaagaaactagatatgctgctcaaaatcccaatattgagtggtattgtcaag
aaaaaaatcaggcaagggcttgggctcaatgaagcccaattggtacttacaggcgcggca
ccaatgccgatttccttgattcgttggtttaggcgtttgggagttaccattcaggaggcc
tacggaatgaccgaaaacctaggggcggtgtgcatgatgcctcacgacaaccccaaagat
ggcagtgtgggtaaaatttacccaggcatggaggtcgtcattgcggaaggtacaggcgaa
attctaactcgttcgccttggaatatgctgggttattaccgtgaaccatccctcactgcc
gacaccatcgactcagatggatggattcacacaggcgatgtaggcgaagtcgatgaagat
gggtacctcaaaattacgggtcgagtcaaagaaatgtacaaaacgtcgaagggagaatat
gtggcaccatcacagatagaatttggctttgcggacaacaaaatgattgagcagatttgt
gttgtagggcaaaatttaccgcagcccatcgccctcgttgttttatcagaaatggcccaa
aaatttgacaaagataccattaatcaaagcctaaattcaaccctttctgaccttaaccct
cgcctaaaaacatacgaaagagtgcaaaaaatagtcatcataaagggcacctggacggtc
gataataacatgcttacccccacaatgaagacaaaaagaaacgttattgaaaaaaattat
gccccaatgatggaaccttggtacgaaaccaaagaaagtataatttgggaatcgtaa

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