Runella sp. SP2: DTQ70_26525
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Entry
DTQ70_26525 CDS
T05690
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rup
Runella sp. SP2
Pathway
rup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DTQ70_26525 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rup03019
]
DTQ70_26525 (recQ)
03400 DNA repair and recombination proteins [BR:
rup03400
]
DTQ70_26525 (recQ)
Enzymes [BR:
rup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DTQ70_26525 (recQ)
Messenger RNA biogenesis [BR:
rup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DTQ70_26525 (recQ)
DNA repair and recombination proteins [BR:
rup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DTQ70_26525 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
Helicase_C
HRDC
DEAD
RecQ_Zn_bind
Cas3-like_C_2
zf-CXXC
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
AYQ35501
UniProt:
A0A3G3GW73
LinkDB
All DBs
Position
complement(6569153..6571300)
Genome browser
AA seq
715 aa
AA seq
DB search
MRQTKEQILKQYFGYDTFRPLQAEIIDWVSAGNDCMVLMPTGGGKSVCYQVPALMTEGLT
IVVSPLIALMKDQVQALRGNGVGAAYLNSTLSSSEQYAIERQCYAGEVKLLYIAPEKLLT
PSCMDFVRGLKVNLLAVDESHCVSVWGHDFRPEYTQLHVLKTAFPDVPMIALTATADRVT
RRDVLKQLGIPDARVFEASFDRPNLSLNVLPGRNRIKVIEQFIHDHPNQSGIIYCLARKT
TEDIALKLRAKGINARFYHAKMPAEDRSAVQDAFLRDDVQVMVATVAFGMGIDKSNVRWI
IHYNMPSNVESFYQEIGRAGRDGLKSTTMLFYSFADWIMRRDMIENSELPQHMKDIQFAK
LDRMKQYAEADHCRRRILLSYFNETVERDCGNCDVCRNPRSKFDATVSAQKALSAIARTD
QKIAMGMLVDVLRGSHNRSVTERGYDKIKTFGVGRDLRAEEWAEYLTQMLNSGVMDVAYD
EAHSLKLNEISWRVLRGERKVELVRFESYEEKRKRQEEQAEPVKTKKEIIRDELFERLRK
VRKRLAEEENVPPFVVFSDATLSDMAEKRPVNRIQMLQVSGVGEAKVAHYGEAFINEILE
YAREKTAPGTRIVSGMTYIETHDLYKQGLSPQQIAQRRNLNELTIYSHLAKLYEDGQEID
LWQYLTKNEYRAITEAAEALGIASQAALKPLFEHLEGHYEYYKLRIALALWGKRN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgagacaaaccaaagaacaaattttaaaacagtatttcgggtacgacacttttcggcca
ctgcaagcggaaattattgattgggtatcggcaggaaacgattgtatggtgctgatgccc
acgggtggcggaaaatctgtgtgttatcaagtgcccgccctcatgaccgagggactcacg
attgtggtgtcgccgctgattgccctcatgaaagaccaagtgcaggccctgcgaggcaac
ggcgtaggcgcggcctacctcaatagcaccctcagcagcagcgaacaatacgccatcgaa
cggcaatgttacgcgggcgaagtcaagctgctgtacatcgcccccgaaaaactgcttacg
cctagttgcatggattttgttcgaggtctaaaagtcaacctgttagccgtggacgaatcg
cactgcgtctcggtatggggccacgattttcgtcccgaatatacccaactccacgtccta
aaaacggccttccccgacgtgccgatgattgccctcaccgccaccgccgaccgcgtcacg
cgtcgcgacgtgctgaaacaattgggtattcccgacgcgcgcgtttttgaggcatcgttt
gaccgtcccaacctctcgctgaacgttttgccaggacgcaaccgaatcaaagtcatcgag
cagttcatccacgaccaccccaatcagtcggggattatttactgcctcgcccgaaaaacc
accgaagacattgccctcaaactacgcgccaaaggcatcaatgcccgcttttaccacgcc
aaaatgcccgccgaagaccgttctgccgtacaggatgcgttcctgcgcgacgacgtgcag
gtcatggtagcgacggtagcgtttggaatggggattgataaatcgaacgtgcgctggatt
atccattacaacatgcccagcaacgtcgaaagtttttaccaagagattgggcgggcaggc
cgcgacggcctcaaatcgacgacgatgttgttttacagctttgccgattggattatgcgc
cgcgacatgattgaaaattcggagttgccgcaacacatgaaagacattcagtttgccaag
ctcgaccgcatgaaacaatacgccgaagccgaccactgccgccgccgtattttgttgagt
tatttcaacgaaaccgtcgaacgcgattgtggcaactgcgacgtgtgccgcaacccccgt
tccaaattcgacgccacggtatcagcccaaaaagccttgtcggccattgcccgtaccgac
caaaaaatagcgatggggatgctggttgatgttttgcggggttcgcacaaccgtagcgtt
acggagcgaggatacgataaaatcaaaacctttggcgtaggccgcgacctccgcgccgaa
gagtgggccgaatacttgacccaaatgctcaattcgggtgttatggacgtggcctacgac
gaagcgcactcgctgaaactcaacgagatttcgtggcgcgttttgcgcggtgagcgtaag
gtggaattggtacgttttgagtcgtacgaagaaaaacgcaaacgccaagaagaacaagca
gagcccgtcaagaccaagaaagaaatcatccgcgatgaactctttgaacgcctacgcaag
gtgcgcaaacgcttagccgaagaagaaaatgtgccgccttttgtggtcttttccgatgcc
acgctctcggacatggccgaaaaacgccccgtcaaccgtattcagatgcttcaagtttcg
ggggtaggcgaggccaaagtagcgcactacggcgaggcttttatcaacgagattttggaa
tatgcccgcgagaaaaccgcaccaggcacccgcatcgtcagtggaatgacctacatcgaa
acccacgatttgtacaagcaagggctttcacctcagcaaatcgcgcagcgacggaatttg
aacgagttgacgatttattcgcacctagccaaactctacgaagacggacaagaaattgac
ctttggcagtacctcaccaaaaacgagtaccgagccattaccgaggccgccgaagctttg
ggcatcgcctcccaggctgccctcaaaccgctttttgagcatttagaaggccattatgag
tattataagctacgaattgcgttggctttgtgggggaaaagaaattag
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