KEGG   Runella sp. SP2: DTQ70_29915
Entry
DTQ70_29915       CDS       T05690                                 
Name
(GenBank) murein L,D-transpeptidase
  KO
K21470  L,D-transpeptidase YcbB
Organism
rup  Runella sp. SP2
Brite
KEGG Orthology (KO) [BR:rup00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rup01002]
    DTQ70_29915
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rup01011]
    DTQ70_29915
Peptidases and inhibitors [BR:rup01002]
 Cysteine peptidases
  Family C82
   DTQ70_29915
Peptidoglycan biosynthesis and degradation proteins [BR:rup01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   DTQ70_29915
SSDB
Motif
Pfam: YkuD Scaffold PG_binding_1 Pkip-1 DUF4538
Other DBs
NCBI-ProteinID: AYQ36550
UniProt: A0A3G3GZ29
LinkDB
Position
7416817..7418484
AA seq 555 aa
MNKNERYIAIAVGVLLLIGAAVYYQFRQKAPVKQAFAPDSTVYSKQDYTTLVLDSTVLAS
FFASRSLADSLQSDVSSFYQRRGYQYAWFSENRLANAANNFNNLRQSYISDFADSSLYNA
EIDRLVNEAEAQGTKFLANKVEVQTLELLLTTAFFQYADKAYAGTVKDLLDLEWFIPRKK
KNFQALLDTLVLAKGQPIREPVNRYYTLLKEKLRQYRIIQQQGGWPKLEFEGKAPKKGDE
DSTVLVLKQNLHRWGDLKTLDSTSIFDDSVAVALKRFQHRMGLTETGKLDEKTLVEMNRP
VEERIRQMMLNMERLRWVPDELEPNMLLVNIPEYRLHVFENGVQSWMSKVVVGKEATKTS
IFKGNLSYVVLNPYWVVTNNIINNEILPKLKRNPGYLARNNMEVVSGNKVVNPYSVKWSS
YTKNIPYTIRQKPGKGNSLGKVKFLFPNSYSIYLHDTPSKSLFGETARAFSHGCIRVSEP
EKLALHVLKSVPEWNEEKLNAVWKTQNEKWITVRPSLPVYIVYFTTWVDNTGQLNFRRDL
YGLDSALAKEVFGEQ
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaataaaaacgaacgttatatcgccatcgccgttggggtgttgctcctgattggagcc
gctgtctattaccaatttcgccaaaaagcacccgttaaacaagcatttgcccccgactca
acggtctattccaaacaagattataccactttggtactcgatagtaccgtgttggcgtcg
ttttttgcgtcgcgctcactggccgatagccttcaatcggatgtgagctcgttttatcag
cgacgcggctatcagtatgcgtggtttagtgaaaaccgtctagccaacgccgccaacaac
ttcaataacttacggcaaagttacatcagcgattttgccgatagcagcttgtacaacgcc
gaaatcgaccgattggtgaacgaggccgaagcccaaggaacgaagtttttggccaataaa
gtagaagtacaaaccctcgaattgctgttgaccacggcgttttttcagtatgccgataaa
gcctacgcgggtacagtcaaagatttgttggatttggagtggtttattcctcgtaaaaag
aaaaattttcaagccttgttagacacgctcgttctcgccaaaggccagcctattcgcgag
cctgtcaatcgttattatacgttgttgaaagaaaaactgcggcagtatcgtatcatccag
caacagggtgggtggcctaaattggaatttgaagggaaagcgcccaaaaaaggcgatgaa
gattcgacggttttggtgttgaaacaaaacttacaccgctggggcgacttaaaaacactg
gattcgacgagcatatttgatgactcggtagccgtggccttaaaacgctttcagcaccga
atgggtcttactgaaacgggtaaattggacgaaaagacgttggtggaaatgaaccgcccc
gtggaagaacgcatccgccaaatgatgctcaacatggaacgcttgcggtgggtacccgat
gaattggaaccgaatatgttgttggtgaatattcccgagtatcgcttacacgtgtttgaa
aacggcgttcaatcgtggatgagcaaagtggtggtgggaaaagaagcgactaagacaagt
atttttaagggaaatctctcgtacgtggtgttaaacccgtattgggtggtgaccaacaac
atcatcaacaacgaaattttgcccaaactgaaacgcaacccagggtatttggcacgcaac
aacatggaagtggtgtcgggcaacaaagtcgtaaatccgtactctgtcaagtggagctct
tacaccaaaaacattccatataccattcgacaaaaacctggcaagggaaattcgttggga
aaagtcaagtttttattccctaatagttacagcatttatttacacgatactccttccaaa
agcctctttggcgagacggcgcgtgcctttagccacggctgtatcagggtgtcagaaccc
gaaaaattggcactgcacgtattaaaaagtgtcccagaatggaacgaagagaagctaaat
gccgtttggaaaacacaaaacgagaaatggataaccgttcgtccttcgcttccagtgtat
attgtctattttacaacttgggtggataatacgggtcagctcaacttccgccgtgactta
tacgggctggatagtgcgttggcaaaagaagtttttggagaacaataa

DBGET integrated database retrieval system