Runella sp. SP2: DTQ70_30020
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Entry
DTQ70_30020 CDS
T05690
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
rup
Runella sp. SP2
Pathway
rup03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DTQ70_30020
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
SNaCT12
Motif
Other DBs
NCBI-ProteinID:
AYQ36560
UniProt:
A0A3G3GZ39
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Position
pSP2_1:7081..8469
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AA seq
462 aa
AA seq
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MIPLGYTSIQPKATVGFHPNPVGVKTSKAITFNGESHLLTVCPTGGGKGVNCLIPTLLTY
EGSTVTLDPKGENYKVTAKRRRAMGHQVVKFDPFKIIDDGFSCDGFNPLDLRHFGGFDIE
EESLSLADQLKGKRRSTHSDIFWDCSAVNVVSAAIAVVLSLYEDEKVNLSEAIRFLMQPE
LVYEFAVVLDNHSTQLPEGTKYSIKTYLETPEQNTRPSVDATVNTYLLSLKSEGILKMLE
KTTFSLEEFIVGSRPMDLYFVWPSDKLESHNGLLSMLLATLFKALLLRTGKPKHRNLFLL
DETAALGAFPLLETIAAIGRGYGITMWLFLQDYAQLKRNFQDGASTLINNCGVHQFFGIK
TFHVAKDIAAITGLNPQQIMSMASDEQYLCVDGEVYPNAKRLNYLLDKNFEGLYEPNSFY
QPQPESLPKARPRPRSVVDKVESTTRKKSKQIALNDDDDDLF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatccccttaggatacacctccatccaacccaaagctaccgtcggttttcaccccaat
ccagttggggtgaaaacctcaaaggccattacgttcaatggcgaatcacatttattgaca
gtttgcccaacgggcggcggaaaaggcgttaattgcctaattcccacgcttcttacctac
gaaggaagcaccgtaactttggaccccaaaggcgaaaactacaaggtaaccgccaaacgc
aggagagcaatggggcatcaagtcgttaaatttgaccccttcaaaatcatcgatgacggt
ttttcgtgcgatggtttcaatccgttggatttgcgccactttggaggttttgacatcgaa
gaagaatcgctcagccttgcagaccaactaaaaggcaaacgtcgtagcacccattccgac
attttttgggattgttccgccgtcaacgtcgttagtgccgccattgcggttgtattgtcg
ttgtatgaagatgaaaaagtcaaccttagcgaagccattcgttttttgatgcagcccgag
ttggtgtatgaatttgcagttgttttagataaccattctactcagctccccgaaggaacg
aaatacagcatcaaaacctatcttgaaacacccgagcaaaatactcgcccatcggttgat
gcgacggtcaatacttacctgctttctcttaagtcggaaggtattctcaaaatgctcgaa
aaaacaaccttctcattggaagaatttattgtgggaagccgacccatggatttatatttt
gtttggccaagcgacaaacttgaaagtcataatggactgctttccatgttattggccacc
ttattcaaagcattattgctccgaacaggcaagcccaaacaccgcaacctgtttttatta
gatgagacagccgcgctcggggcttttcctttattggagacaattgccgccattggtcga
ggctatggtatcacgatgtggctgttcctccaagattatgcccaattgaaacgaaatttt
caagacggtgcctccaccctcatcaacaattgcggagtgcatcaattttttggcattaaa
acttttcacgtagccaaagacattgcggccatcacggggctaaacccacagcaaattatg
tctatggcttccgacgagcagtacctctgcgtagatggggaagtttaccccaatgccaag
cgactcaactaccttctggacaaaaactttgaaggactctatgagccgaactctttttac
caacctcaacccgagagtttacccaaagcccggccacgtccccggtcagtagtggataaa
gtagagagtaccacccgaaagaagtccaaacaaatcgctctgaacgatgacgacgatgat
cttttttaa
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