Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00082
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Entry
RBI_I00082 CDS
T03158
Name
(GenBank) Glycoside Hydrolase Family 5 protein
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00500
Starch and sucrose metabolism
rus01100
Metabolic pathways
rus02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RBI_I00082
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBI_I00082
Enzymes [BR:
rus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
RBI_I00082
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Gene cluster
GFIT
Motif
Pfam:
Cellulase
fn3
Big-like
Sgo0707_N2
Big_2
Glyco_hydro_35
Pur_ac_phosph_N
CBM_X2
Amidase_3
Motif
Other DBs
NCBI-ProteinID:
CCO03822
LinkDB
All DBs
Position
I:complement(96605..99319)
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AA seq
904 aa
AA seq
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MKSVSKRYLSFILSLLMAMTIFIGLDLGDINAQALSGDTLKNADTEAILEDMGLGWNLGN
SLDATGGSGLDTETSWSNPKTTQALIDKVKSLGFNTVRVPVSWGKHVSGDNYTIDSAWLA
RVKEVVDYCYKNDMYVILNIHHDTKSSASASGAGYYPRSSAYSSSEKFVTSVWSQMAEYF
KDYDYHLIFETLNEPRLIGTGYEWWFNKWSIPSEVKDAIDCINRLNQKAVDTIRNTGSNN
KGRLIMCPGYDASIDGATVSGFKLPTDISGNKNRIAVSVHAYSPYNFAMNVGSGSTSTYT
SSIKSELRDLFSTLKSNFRDKGIPVVIGEFGSTDKNNTAERVKWATDYTALAKKNNIPCV
LWDNNAFAVYNGSSIVLNSEYHGYINRKNNTVTSPAKDVIEALMKPYGKKADLNCSSSVT
IVAGQSKNIGASSSTSGAVLTYKSTTPSICTVDKNGNVTALRTGTGYVTITASANGYDSV
SKDVKIVVSKKSLNNGLLTLSETSYVYDGTYKKPAATVTFGGKVLQEGKDYTISYRNNLN
VGVTTVIATGMGDYTGYTSKNFTITKRAMAGGTVSVASSVSFTGSNITPSVTVKVAGRTL
TSGTDYTVSYSNNKNVGTSNVYVYGKGNYSGSLSAKFDIVPAKQQIQKLETKYKGFYIDW
AQKGSATGYDIEYSVNSNMSGAVSKHLTANKPDTLTVSGLSGDKTYYVRVRSYTNVNGKV
YYGAWSDIKSIKTANNDITKATVSGISTKAFTGKAITQNVTVKVGNTVLKNGTDYTVSYS
NNKKVGKATVKITGKGKYGGVITKTFKINPAKQEIQKLTAKSKAFFVDWAQKGSATGYEI
QYATNSKFTGAKKVAITNNKTDKTTVSKLSGNKKYYVRVRSYTTVGGTKYYGSWSATKTV
TTKK
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagtatcaaaaagatacctgagctttattttatctcttttaatggcaatgacc
atatttattggtcttgaccttggggatataaatgcgcaggcattgtcgggagatactctc
aaaaacgctgacacggaagccatacttgaggatatgggtctgggctggaatttgggcaac
tctcttgacgcaacaggcggttcaggtcttgacacggaaacatcgtggagcaatcctaaa
acaactcaggctcttatagacaaggtaaagtctttaggcttcaacacagtgagagtgcct
gtttcatggggcaagcacgtatcgggtgacaactacactatcgactcagcatggcttgca
agagtaaaggaagtagttgactactgctacaaaaacgatatgtatgttattttgaatatt
catcatgacacaaagtcttctgcaagcgcttcgggagcaggatattatccaaggtcttct
gcatattcaagctctgagaaatttgttacgagcgtatggtcacagatggcagaatatttc
aaggattatgactatcatcttatatttgaaacccttaacgagcctcggcttattggcaca
ggctatgagtggtggttcaacaagtggagcattccgtcagaggtaaaggacgctatcgac
tgcattaacaggctcaatcagaaggctgttgacaccataagaaacacaggctcaaacaac
aagggcagacttatcatgtgtcccggttacgacgcttccatagacggggcaactgtttca
ggcttcaagcttccaacagatatctcaggcaacaaaaaccgcatcgctgtatcagttcac
gcttacagcccttacaactttgcaatgaatgttggttcaggctcgacctctacatataca
tcttcaataaagagtgagcttcgggaccttttcagcacgctgaaaagcaatttccgtgac
aagggtatacctgttgttatcggcgagtttggctcaacagacaagaacaacactgcggag
cgtgtaaagtgggcaacagactacactgcgcttgcaaaaaagaacaacattccatgcgta
ctgtgggacaacaatgcttttgcagtatacaacgggagcagcattgttctcaacagtgaa
tatcacggctacataaacagaaaaaacaacactgttacaagccctgcaaaggacgttatc
gaggctcttatgaagccttacggcaaaaaagcagatcttaactgctcttcaagcgttacc
atagttgcgggacagagcaagaacattggcgcaagctcatcaacaagcggtgctgttctc
acatacaaaagcacgactccgtcaatatgcactgttgacaagaacggaaacgtgaccgct
ctcaggacaggcacaggatatgttactattacggcttctgcaaacggttatgacagcgtt
tcaaaggacgttaagatagttgtttcaaagaagagccttaacaacggacttcttacgctt
tcagaaacaagctatgtttatgacggcacatacaaaaagcctgcggctacagttacgttt
ggcggcaaggtgcttcaggaaggcaaggattacactatctcatacagaaacaatctgaac
gttggcgttacaactgttatcgcgacaggcatgggcgactacacaggttacacatcaaag
aacttcactatcacaaagcgtgcaatggcaggcggaacagtttcagtggcttcaagcgtt
tcattcacgggaagcaatattactccgtcagttacagtaaaggtagcaggcaggacgctt
acaagcggcactgactacacagtttcatactcaaacaacaagaacgttggcacgtcaaac
gtttatgtatacggcaagggcaactattcaggctctctgagcgctaagttcgacattgtt
cctgcaaaacagcagatacagaagcttgaaacaaaatacaagggcttctatattgattgg
gcgcagaaaggctctgcaacgggatatgacattgagtattctgtaaactcaaacatgagc
ggtgcagtgtcaaagcatttgacagcaaacaagcctgacacgctgacagtaagcggtctg
tcaggggacaagacatattatgttcgtgttcgttcttacacaaacgtaaacggcaaggta
tactacggcgcatggtctgatataaagagcataaagacagctaacaacgacatcacaaag
gctactgtttcgggcatttccacaaaggcgttcacaggaaaggctattacacagaacgta
actgtaaaggtgggaaacactgttcttaaaaacggcactgactacacagtttcatactcc
aacaacaaaaaagttggcaaggctactgtaaagataacaggcaagggcaagtatggcgga
gttatcacaaagacgttcaagataaatcctgcaaagcaggagatacagaagcttacggct
aagtcaaaggcattctttgtggattgggcgcaaaaaggctctgctacgggatatgaaatt
cagtatgcaaccaactcaaagttcactggtgcaaagaaagtggctataacaaacaacaag
acagacaagaccactgtttcaaagctttcgggcaacaagaaatattacgttcgtgtgaga
tcttacacaactgtaggtggcacaaagtattacggttcttggtcggcaacaaaaactgtc
actacaaagaaataa
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