Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00135
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Entry
RBI_I00135 CDS
T03158
Symbol
pth
Name
(GenBank) Peptidyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rus03012
]
RBI_I00135 (pth)
Enzymes [BR:
rus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
RBI_I00135 (pth)
Translation factors [BR:
rus03012
]
Eukaryotic type
Release factors
RBI_I00135 (pth)
Prokaryotic type
RBI_I00135 (pth)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
Motif
Other DBs
NCBI-ProteinID:
CCO03875
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All DBs
Position
I:160087..160710
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AA seq
207 aa
AA seq
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MDIFEKLKKLSAERETAMGKPEYIIVGLGNPGVAYENTRHNAGFLAVAAMEKKYGFTVNT
HKFKALVGRAVIGGKSCLVMKPETFMNNSGEAVSDAMDFYDIPLENVVVVYDDISLDVGK
MRICRNGSAGGHNGIKSIIALCGGQDFPRVKIGVGKKPHPDYNLADWVLSRFTDEEMKKL
SDVDKNTCEAVELMVQGKINEAMNKFN
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggatatatttgagaaattaaagaaattgtctgccgagagggaaacggctatgggcaag
cctgagtatattatcgtgggtcttggaaaccccggtgtggcttatgagaatacacgccat
aacgcaggctttctggcggtggcggctatggaaaagaaatacggatttacggtgaatacg
cataagttcaaggctcttgtgggacgtgccgttataggcggaaaaagctgtcttgtcatg
aagcctgaaactttcatgaacaatagcggtgaggctgtcagcgacgctatggatttttat
gatataccgcttgaaaatgttgtcgtggtctatgacgatatttcacttgacgtgggcaaa
atgaggatatgcagaaatggttcggctggcggtcataacggcataaaaagcattattgca
ctgtgcggcggtcaggatttcccaagggtaaaaataggcgtgggcaaaaagcctcaccct
gattacaacttggctgactgggtgctttcaagattcactgacgaggaaatgaaaaagctt
tctgatgtggataaaaacacctgcgaggctgtggagcttatggtgcagggcaagataaac
gaggctatgaacaagttcaattaa
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