Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00392
Help
Entry
RBI_I00392 CDS
T03158
Name
(GenBank) conserved hypothetical protein
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rus03016
]
RBI_I00392
Transfer RNA biogenesis [BR:
rus03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
RBI_I00392
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP_bind_3
Rhodanese
tRNA_Me_trans
DUF7411
Diphthami_syn_2_N
NAD_synthase
RTC4
Motif
Other DBs
NCBI-ProteinID:
CCO04120
UniProt:
A0ABM9QEP2
LinkDB
All DBs
Position
I:complement(434735..435841)
Genome browser
AA seq
368 aa
AA seq
DB search
MINTSGNTLIIDIRDELSFEYGHIDGAVNIPAEKLDKSDLPKDKKLLICCKSGLISDTEA
EKLRELGYDAENLEGGYYGWLREKLSKEVVEDISQDAERSIQKKFRKEIWNRFTQSVNEY
ELIKPNDRIAVCISGGKDSMLMAKLIQMLHRHSKFPFEVKFLVMDPGYSPANREIIERNA
KRLGIPITVFESDIFDSVYNVEKNPCYLCARMRRGHLYSKAQELGCNKIALGHHYDDVIE
TILMSMLYGGQIQTMMPKLNSTNFEGMQLIRPLYMVREDDIKRWRDYNGLRFIQCACKFT
DTCTTCAPDSRTVSKRMEIKQLIAKLKLVNPQVEYNIFKSVENVMLNQVIAYKDDEGRHS
FLERFKEE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgataaacacaagcggcaacacgctgataatagatataagggacgagctttcttttgag
tatggtcacattgacggagcagtgaacatccctgccgaaaagcttgataaaagcgacctg
ccaaaggacaaaaagcttcttatctgctgtaaaagcggacttataagcgacactgaggca
gaaaagcttcgagagcttggctatgacgctgaaaacctagagggtggctactatggctgg
ctgagagaaaagctttccaaagaggtcgtagaagatatctcacaggacgctgagcggagc
atacaaaagaaattccgcaaggagatatggaacagattcacacaatctgtgaacgaatat
gagcttataaagcctaatgacaggatagcggtgtgcatatcgggcggcaaggattcaatg
ctcatggcaaagctcatacaaatgcttcaccgccacagcaagttccctttcgaggtaaaa
tttcttgttatggatccgggctacagccctgcaaaccgtgagataatcgagcgcaacgca
aagcggcttggaatacccataacagtgtttgagtctgatatttttgactctgtatacaat
gtggagaaaaatccatgctatctgtgcgcacgaatgagaagaggtcatttatacagcaaa
gcacaggagcttggctgtaacaagatcgcacttggacatcactatgatgatgttatcgag
accatacttatgtcaatgctttacggcggacagatacagacaatgatgccaaagctcaac
agcacgaattttgagggtatgcagctcataaggccgctctatatggtcagagaggacgat
atcaagcgctggcgtgactataacgggctgcgtttcatacagtgtgcctgcaagttcacc
gacacctgcaccacctgcgcacctgacagcaggacagtatcaaagcgtatggagataaaa
cagcttattgcaaagctaaagcttgttaatccgcaggtagaatacaatattttcaagagt
gtggagaatgttatgctcaatcaggtcattgcatacaaagacgacgagggcagacacagc
tttttggagagattcaaagaggaataa
DBGET
integrated database retrieval system
