Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00494
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Entry
RBI_I00494 CDS
T03158
Name
(GenBank) Carbohydrate-Binding Module Family 35 protein / Glycoside Hydrolase Family 26 protein
KO
K01218
mannan endo-1,4-beta-mannosidase [EC:
3.2.1.78
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00051
Fructose and mannose metabolism
rus01100
Metabolic pathways
rus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
RBI_I00494
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBI_I00494
Enzymes [BR:
rus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.78 mannan endo-1,4-beta-mannosidase
RBI_I00494
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_26
CBM_35
fn3
CRLF2-like_D2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_3
I-set
HL_N-beta
Hexapep_GlmU
Motif
Other DBs
NCBI-ProteinID:
CCO04218
LinkDB
All DBs
Position
I:complement(538794..541523)
Genome browser
AA seq
909 aa
AA seq
DB search
MKFNIKKVAAAFLSVAMLTTGSAQLSVFAQQTLKYEAENGTLGGSAYIQTDSSASGSRSV
SFSDSSCTWSQTVTVSESGYYKIKLYSRGEGSNKINNLSVNGSNAGTFSSANGSAYKAST
VNGIYLKKGQNTVKITMSWGYFTLDYITIEKMSSSNAYTAAENLVDPYASQSTQRLYSYM
KDVYGKKVITGQYCDGGLNGTEFKAIKSATGQTPAMLGLDFMRYTPCRVQNGDTSDAVEK
AIEFSRAGGIVTFCWHWNVPDKYLLSGTDGGNPRWWGGFYTKNVDRSKFSLTKIMNGSDP
KGYNTLMSDVDEIAKQLKRLSDADVPVLFRPLHEASGGWFWWGADGSEAYKKLWQAIYDK
LTNEYKLDNIIWVWNGQAANWYPGDEYVDIIGEDIYPGTRDYSAQSSKYLEATDYSPNGK
IVALTENGCLFDLDKAFDANTAWSYFGTWSGEFCISSSEKYTEKSMWQKVYNSDYAVTLS
SLPDLKSYPISSDNTQITLDSTSKEVTYGDSITLKASVTSGTPQTVTWKSSNTAVATVKD
GVVTATGKGTAKITASLPNGRSAVCTVKVTTKKLPTSGYSYASTAQYTGSAIIPTVTVKD
GSKVLRQNIDYRVMVTNNVKIGHANIAISGMGNYYGSYSAGFDIIPAKQTIQKLETRYKG
FFVDWAQKGSATGYDIQYSTSANMSGAASKHLTANKPDNLTISGLTADKTYYVRVRSYTN
VGSKTYYGPWSDIKSIKTAKYDITKASVSGISTKAYTGKAITQNITVKYNGTALKNGTDY
TTSYSNNKKIGKAIVKITGKGKYGGIIKKTFTINPAKQEIQKLTSKSKAFFVDWAQKGSA
TGYEIQYATNSKFTNAKKVTITNNKTDKTTISKLSGNEKYYVRVRSYTTVNGTKYYGAWS
VSKSVTTKK
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaatatcaaaaaggtcgcagccgcatttttaagtgtggcaatgctcaccaca
ggctcggctcagctttctgtttttgcacagcagacgcttaaatacgaagccgaaaacggc
actttgggcggttctgcctatatccaaacagacagctccgcatcaggctctaggtcagtt
agtttttcagactcaagctgcacatggtcacagactgttacagtcagcgaaagcggatac
tacaaaataaagctttacagccgcggagaaggatcgaataagataaacaacctttctgta
aacggctcaaatgcaggtactttcagcagtgcaaacggctctgcctataaagcgtccaca
gtgaatggtatttatctcaaaaaggggcagaacactgtcaaaataacaatgtcgtgggga
tattttactctcgactacataaccattgaaaaaatgagctcttcaaatgcctacaccgcc
gctgaaaatctcgttgacccatacgcttcacaaagcacacagcgcctttacagctatatg
aaggacgtttacggcaaaaaggtcataacaggacagtattgtgacggtggtcttaacggc
actgagttcaaagctataaagtccgccacaggtcagacccctgctatgttgggtcttgac
tttatgcgctatactccatgccgtgtccagaacggtgacacctccgacgctgtcgaaaag
gctatcgagttttcacgggcaggaggaatagtaacattctgctggcattggaacgtccct
gacaaatatcttctctcaggtacagacggcggaaatccacgttggtggggtggtttttac
accaaaaacgttgaccgctcaaagttctcgcttaccaaaataatgaacggctcagaccct
aagggctacaacactcttatgagcgacgttgacgagatcgccaaacagctcaaacgtctt
tctgacgcagacgttccggtactgttcagaccgctccacgaggcaagcggcggttggttc
tggtggggtgcagacggctcggaagcctacaaaaagctttggcaggcaatatatgacaag
ctcacgaatgaatacaagcttgacaatatcatatgggtatggaatggtcaggcggcaaat
tggtatcctggcgacgaatatgttgacataatcggagaggatatctacccaggcacaaga
gattattcagcccaaagctcaaaatatcttgaagccacagactattcaccaaacggaaaa
atagttgcccttacagaaaacggctgtcttttcgaccttgacaaagcctttgatgcaaac
accgcatggtcatatttcggcacatggagcggtgagttttgcatatcaagctctgagaaa
tataccgagaaaagtatgtggcaaaaggtctataacagcgactatgctgtgacactttca
agtctgcccgacctgaaaagctatcctatcagcagtgacaatacacagataactcttgac
tccacgtcaaaagaagtcacatacggcgacagcattaccctaaaagccagcgtgacctca
ggcacccctcagacagtaacatggaaaagctccaacacagccgttgccacagtaaaagac
ggtgttgtgaccgccacgggcaaaggcacagcaaagataacagcctccctgcctaacgga
aggtctgccgtgtgcactgtaaaggtcaccacaaaaaagcttccaacatcaggctattcc
tatgcaagcactgcacagtacacaggcagtgcaattattccgacagtcactgttaaggac
ggaagcaaagttctccgtcaaaacatcgactatcgtgtgatggtcacgaacaatgttaaa
atcggtcacgctaacatcgctatctcaggcatgggcaactactacggcagttattccgca
ggctttgacattatccctgccaagcagaccatacaaaagcttgaaacaagatacaaaggc
ttctttgtggattgggcgcagaaaggctctgcaacgggctatgacattcagtattccacc
agtgcaaacatgagcggtgcggcttccaaacacctcactgccaacaagccagataacctg
acaataagtggtctgacagccgataagacctactacgttcgtgtgcgttcctacacaaac
gttggaagcaagacctattatggtccatggtctgacataaaaagcataaagaccgcaaaa
tatgatatcacaaaagcttccgtttctggcatttccaccaaggcatacacaggcaaggct
ataacgcagaacattactgtgaaatacaacggcactgccctgaaaaacggaactgattac
acaacttcctactcaaacaacaaaaaaatcggcaaggcaattgtcaagataacaggcaaa
ggcaaatatggtggcattatcaagaagacctttaccataaaccctgccaagcaggagata
cagaagcttacgtctaaatccaaagcatttttcgtggattgggcgcagaaaggctctgca
acgggctatgagatacagtatgcaactaactccaagtttacaaacgcaaagaaagtcacc
ataacaaacaacaagaccgacaagaccacaatctccaaacttagcggcaacgagaaatat
tacgttcgtgtccgttcctacacgacagtgaacggcacaaaatattacggtgcatggtcg
gtttcaaagagcgtgactacaaaaaaataa
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