Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00570
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Entry
RBI_I00570 CDS
T03158
Symbol
birA
Name
(GenBank) Bifunctional protein birA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00780
Biotin metabolism
rus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
RBI_I00570 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rus03000
]
RBI_I00570 (birA)
Enzymes [BR:
rus01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
RBI_I00570 (birA)
Transcription factors [BR:
rus03000
]
Prokaryotic type
Helix-turn-helix
Other families
RBI_I00570 (birA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
MarR_2
BPL_LplA_LipB_2
HTH_23
HTH_Crp_2
Tudor_3
nlz1
HTH_36
MarR
Prenylcys_lyase
Motif
Other DBs
NCBI-ProteinID:
CCO04294
UniProt:
W0U4A1
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All DBs
Position
I:complement(628480..629454)
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AA seq
324 aa
AA seq
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MAIKDKVLELLDDNKGKYLSGEQLADTLGCTRGAVWKAVKALQENGYPISAVTNKGYSLD
ENTDILSLAGIKKYLDPDRQGLEIEVYKEVSSTNLVLKDYANQGVPEGRIVIAGMQTQGR
GRLGRSFFSPSDSGLYMSILLRPDMAAADAVKITTAAAVSVALAVEKVSDQKPDIKWVND
IYINGRKICGILTEASFSMESGGLDYAVLGIGVNTYEPEGGFPEAIRDIAGPIFHERKSD
MRNRIAAEIINNFMRLYDSFEENSFYPEYRKRLLWVGEKINVIRGSEKTPATMLGADEDC
RLHVRYEDGREEYISSGEISIRKA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaataaaagacaaagtgctggaacttctcgacgataacaagggcaaatatctttca
ggcgaacagcttgctgacacgcttggctgtacccgtggggctgtttggaaagctgtgaaa
gctttgcaggaaaacggttaccctatctctgcggtgacgaacaagggctattcccttgat
gaaaacaccgatatactttcccttgcaggcataaaaaaatatcttgaccctgaccgtcag
gggcttgaaatagaggtatacaaggaagtaagctccactaatctggtactcaaagactat
gcaaatcagggtgtgcccgagggcaggatagtcattgcaggtatgcagacccaggggcgt
ggaaggcttggacgttctttcttctcgccatctgattcgggactttacatgagcattctt
ctccgccctgacatggctgcggctgacgctgttaagataaccactgctgctgcagtttca
gttgcccttgctgtggaaaaggtcagcgatcagaaacctgacataaaatgggttaacgac
atttacataaacggcaggaagatatgcggaatactcacggaggcttctttcagcatggaa
agcggcggacttgactacgctgtgcttggcatcggtgtaaacacctacgagccggaaggc
ggttttcctgaggcaataagagatatcgcaggaccgatattccacgaaagaaaaagcgat
atgcgaaacaggatagccgcagagataataaacaatttcatgcgtctttatgacagcttt
gaagaaaacagcttttacccagaatacagaaaacgcttgctgtgggtaggcgagaagata
aacgtcataagagggagcgaaaaaactcctgccacaatgcttggggctgatgaggactgt
cgcctgcacgtcagatatgaggacggcagagaagaatatatttcttcaggagagataagt
attcgcaaggcttaa
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