Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00739
Help
Entry
RBI_I00739 CDS
T03158
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus03030
DNA replication
rus03430
Mismatch repair
rus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBI_I00739 (dnaX)
03430 Mismatch repair
RBI_I00739 (dnaX)
03440 Homologous recombination
RBI_I00739 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rus03032
]
RBI_I00739 (dnaX)
03400 DNA repair and recombination proteins [BR:
rus03400
]
RBI_I00739 (dnaX)
Enzymes [BR:
rus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBI_I00739 (dnaX)
DNA replication proteins [BR:
rus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBI_I00739 (dnaX)
DNA repair and recombination proteins [BR:
rus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBI_I00739 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
RCF1-5-like_lid
DnaX_C
TniB
DNA_pol3_a_NII
AAA_14
AAA_24
AAA_assoc_2
AAA_30
AAA_19
TsaE
AAA_7
Sigma54_activ_2
DUF815
DNA_pol3_delta_C
AAA_16
Herpes_Helicase
AAA_2
Zeta_toxin
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CCO04462
LinkDB
All DBs
Position
I:complement(839283..840893)
Genome browser
AA seq
536 aa
AA seq
DB search
MYQALYRKWRPMSFDDVVSQPHITTTLKNQIKSGKTAHAYLFTGSRGTGKTTCARIFAKA
INCLDPHDGEPCLECEICKDADNGTLSDIIEIDAASNSKVDDIRELREGVVYTPERCKYK
VYIIDEVHMLSAGAFNALLKTMEEPPPHVKFILATTEIHKVPATIVSRCQHFDFHRIRNE
DIVSRLMYIASQEGFTLHEDAAGMIARLSDGGMRDALSLLDQCVAYENDITLDVVSSASG
IAGRDYLFDILEKIAEKDAAGALRVVDKLYDMSKDLKVLAGELLAQMRNVMIIKTIDNNK
DLITCLPDEYERLKALAERMKLDEILGDINTLQECSERFAKSTSKRIELEMCIIKLCGAA
QKAGATAQAVSGNAEITVLLNRITQLENALKSGSVLQTQPQIATPAQQEQAPPPKPFDPD
FKKMKASDFKLVQTWDNIVEQVKQTNPAIGCFLINSKAYMCQNVLLMIVHNDFYLKKFKA
SGDATVLNEILKNNFGQNFTIKVKSAKNVAPEDTENPINQLLDKAKKLDIEVDIKK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
ttgtatcaggcattgtacagaaaatggcgtccaatgtcatttgacgatgttgtttcacaa
ccgcatattacaactactctcaaaaatcagataaaaagcggcaagaccgctcatgcctat
cttttcacaggctcgagaggtacgggaaagaccacctgcgcaagaatttttgcaaaggct
atcaattgccttgacccacatgacggtgagccatgccttgaatgtgagatatgcaaagac
gctgacaacggcactctttccgatattatcgagattgacgctgcttcaaattctaaagta
gacgatatcagagagttgcgtgaaggcgttgtctatactcctgaaagatgtaaatataag
gtatatatcatagacgaggtgcatatgctttccgcgggcgcattcaatgccctgctgaaa
actatggaagaacctcctccgcatgtcaagtttattcttgccactacggagatacataaa
gttcctgctactatcgtgtcgagatgccagcatttcgactttcacaggataagaaacgag
gacatcgtttcaaggcttatgtatattgcttcacaggagggctttaccctccacgaagat
gctgcaggcatgatagcaaggctttctgacggtggtatgcgtgacgcactttctctttta
gatcagtgcgttgcctatgaaaatgacataacccttgacgttgtgtcctcagcttccggc
attgcaggacgtgattatctttttgatattcttgaaaagatagccgaaaaggacgccgca
ggcgcactcagagtcgttgacaagctttatgatatgtcaaaagatctgaaagtcttggca
ggtgaactgctcgctcagatgagaaatgtcatgataatcaaaactatcgacaacaacaag
gatcttataacttgtctgcctgacgagtatgaaagacttaaagcccttgcagaacgcatg
aagctggacgagatactcggggatataaatactttgcaggagtgcagcgagcgttttgcc
aaaagcacatcaaagcgtattgagcttgaaatgtgtatcataaagctgtgcggagctgct
caaaaagcaggtgcaactgcgcaggctgtatcaggcaatgctgagatcacagtgcttctt
aatagaataactcagcttgagaatgcactaaaaagtggttccgttttgcagactcaaccg
cagatcgccacaccggctcagcaggaacaagctccaccaccaaagccttttgacccggat
ttcaagaaaatgaaagcaagcgacttcaagcttgtgcagacttgggacaacattgtggag
caggtcaagcagacaaatcctgccataggctgtttcttaatcaattcaaaggcttatatg
tgtcagaatgtgctgcttatgatagtacacaatgacttttatctcaaaaagttcaaagca
agcggcgatgctacagtgcttaatgagatactgaaaaataatttcggacaaaacttcact
atcaaagtcaaatcagccaaaaatgtcgcacctgaggatacggaaaatcctataaatcag
ttgcttgacaaagcgaaaaaacttgatattgaagttgatataaaaaaataa
DBGET
integrated database retrieval system
