Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00793
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Entry
RBI_I00793 CDS
T03158
Name
(GenBank) Glycoside Hydrolase Family 5 protein / Carbohydrate-Binding Module Family 23 protein
KO
K19355
mannan endo-1,4-beta-mannosidase [EC:
3.2.1.78
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00051
Fructose and mannose metabolism
rus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
RBI_I00793
Enzymes [BR:
rus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.78 mannan endo-1,4-beta-mannosidase
RBI_I00793
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Gene cluster
GFIT
Motif
Pfam:
CBM65_1
CBM_X2
CBM_11
Cellulase
Shr-like_HID
CIA30
Motif
Other DBs
NCBI-ProteinID:
CCO04515
LinkDB
All DBs
Position
I:891463..895431
Genome browser
AA seq
1322 aa
AA seq
DB search
MTGVMRRFSAALAAAAMAVSIVPFADISAYAEYAATHPEGFVYVDGSKFMCDGSPYYYGG
TNCYYLTYKSKSEVKNVFDDASKMGLKVIRIWGNLDVGKKTGEIDSQSGHETFEGNNDGT
GEKDGVYFQYWDDEAGKPVVNEGEDGLRHLDYIIKQAEEHDMKLVITFTNYWEAFGGMGQ
YVKWYQMSQGKSVGNSKVDEKDTCDFYTNETIKGWYKDYIKTLLNHTNYYTGEKLMDSEA
VFSWELSNEPRCTVDEFCKDDILYNWAKEMSAYVKSIDPYHMVSVGDEGFYNLGYQEAAR
QDLPSSAYSGYYGVDFDKLMTIDTVDFGTPHMYVDQWGFDLGDDDLEWIKRHAQTTSSAD
KPIIFEEFGLTDKTKRDAAYSDWLDIVTGDYYEGVEYQGFNYWMIASYLDDGTLYQDYDG
YTVYGPEGIEKTDSTRTLMMNAAAKMEKKNIVNTTDKSTYSFDRSKSGNVVVNVSMKEGS
ISGVEVGGKKLSSDDYTIRGNAVTIKASYLKRQELAKYSCRILTTGGNQPKFNLTVSDSS
IPKPIISPEIISVDVNPKKCSDVDITMDRKTSEFRGIVADGKALAEGTDYTTSGDTVTIK
SAYLKTLSAGIVTLKFDFYEGEDRELTINVFDTTGFDELDTFESYSNDKALWSSYSRNTG
GNEVSLSLAAKNGSKALAFGYDIGSPNGYCGVNHPIAVRNASSFAGVELWVEGDGTGNSL
TVQLRDANDNYFEAQIALDFAGGKTIKIPFADFKAPSWQSGGNLDTSKLNQFSFYMGGDS
ARKTGTVYIDNVVFYEDGQIEKPHLSTKSGIFDADAPSGVRTDLVLYGKSVESIIVNGKK
LTGGLDYSTSGSQIMLNESWLKTLTNGNYTLTYTFSDGSTDTFALTVKNVKSSHIHSYTA
KVTKEATCTTDGEKIYTCTCGDRYTETIPAKGHSWVKGETVAPTENEKGYTIYTCASCGE
TKKDDYTDPIGHRHSYTLTSTKAATCEADGEKVYTCSCGEKYTETIPATGHSESTWIIDK
AATATENGSKHTECTTCGKVIKTEVIPATGEVSDKKETVIFTGSAKTSGWGQAITLSTTK
EGGSFDSSVIEKDGYFEVQFKGGTDKAEVILQSWSGGADWARVSPTEVTEKDGIVYAKYS
YDDVAAAFGTTDFSKVDRFHVGAANGDIEVLSVKYIVGKSTEPVDPVDPVDPDKPEQDPY
VSIFWGAKSCGSWGQAVSVMTSKNYGSFDVSHLSANGYFYVEYSGAENELELILQSWSGG
ASWARVQPSETGRVHDHYYAKFTYADCVKELGTGFDKLDQLHAAAKNGDITVYSICYCTP
AR
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagtaatgagaagattttctgcggctctggcggctgctgcaatggctgttagc
attgtgcctttcgcagatatcagcgcatatgcggagtatgcggcgacacacccagaggga
tttgtttatgttgacggctcaaagtttatgtgtgacggaagcccttactattacggcggc
acgaactgctattatctcacctataagtcaaagagtgaggtaaagaatgttttcgatgac
gcttcaaaaatggggcttaaagtaataagaatttggggaaatcttgacgttggtaagaaa
acaggcgagatcgactcgcagtctggtcatgagacctttgagggcaacaatgacggaacg
ggcgaaaaggacggagtttacttccagtattgggacgatgaggctggcaaacctgttgtg
aacgagggcgaggacggcctgagacatcttgattatattatcaagcaggctgaagaacat
gatatgaaacttgttatcactttcacgaactattgggaagcgttcggtggaatgggtcag
tatgtaaagtggtatcagatgtcacagggcaagagcgttggcaatagcaaagtggacgaa
aaggacacctgtgatttttacactaatgaaactatcaagggttggtataaggattatatc
aagactttgttaaatcacaccaactactacacaggcgagaagcttatggattctgaagct
gttttttcttgggagctttcaaacgagccgagatgtactgttgacgagttctgcaaggac
gatattctttataactgggcaaaggaaatgtcagcatatgtaaagtctatcgacccttat
cacatggtatctgttggcgacgagggcttttataaccttggctatcaggaagctgcaagg
caagatcttccgtcttccgcatattcaggctactacggtgttgactttgacaagcttatg
actatcgacactgtagactttggcacaccgcatatgtacgttgatcagtggggctttgac
cttggcgatgatgacctcgaatggataaagcgccatgcccagaccacatcttccgctgac
aagcctattatctttgaggaattcggtcttacagacaaaacaaagcgtgacgccgcttat
tccgattggctggatattgtaacaggggactactatgagggtgttgaatatcagggcttc
aactactggatgatagcttcctatcttgatgacggcactctttatcaggactatgacggc
tacaccgtttacggccctgagggtatcgaaaagacggacagcacaagaactcttatgatg
aacgctgctgcaaaaatggaaaagaagaacattgtaaacaccactgacaagtctacatac
agttttgacagaagcaagtcaggtaacgttgtggtgaatgtttctatgaaagagggcagc
ataagcggtgttgaggtcggcggaaagaaactctcgtcagacgattacaccataaggggc
aacgctgttactatcaaggcttcttatcttaaaaggcaggagcttgcaaagtattcgtgc
aggatactcacaacaggcggcaatcagcctaagttcaatctgacggtgagcgacagctct
atccctaagcctattatctctcctgagataatctctgttgacgtaaaccctaagaagtgc
agtgatgttgatatcaccatggatcgcaagacaagcgagttcagaggcattgttgctgat
ggaaaagcactcgcagagggtacagattacacaacttcgggcgacactgtgaccattaaa
agtgcatatctcaagacgctttcagcaggcattgtgacgcttaagttcgatttctatgag
ggcgaggatagggagcttacaataaatgttttcgacaccacaggctttgatgagcttgac
acatttgagagctattcaaatgataaggcactttggtcgtcttattcaagaaacacaggc
ggcaatgaagtttcactttctcttgctgctaagaacggttcaaaggcgcttgctttcgga
tatgatatcggctcgccaaacggctactgcggagtaaaccaccctattgcagtaagaaat
gcttcatcatttgcaggcgttgagctttgggtagagggggacggcacaggcaacagcctt
actgttcagcttagagacgcaaacgacaattattttgaagcgcagatagcacttgatttc
gcaggcggaaaaactatcaagataccattcgctgactttaaagcgccaagctggcagtcg
ggcggaaatcttgatacatcaaagcttaaccagttctcgttctatatgggcggagattct
gcccgaaagacaggtacagtttacatagacaatgttgttttctacgaggacggacagatc
gagaagccacacctttccacaaagtcaggcatatttgacgctgatgctccaagcggtgtg
agaacagaccttgtgctttatggaaagagcgtagagtctatcatagtaaacggcaagaag
cttacaggcggcttagattattctacaagcggaagtcagataatgctcaacgaaagctgg
ctcaagacgcttacaaatggtaattacacacttacatacacattctcagacggaagcaca
gatacatttgcactcactgtcaagaatgttaagtcatcacacattcacagctacaccgca
aaggtaacaaaggaagctacatgcacaacagatggcgagaaaatttacacttgtacttgc
ggagacaggtacactgaaactatccctgcaaagggtcacagctgggtaaagggcgagaca
gttgctcctacagagaacgaaaagggctacactatctacacctgcgcttcctgcggcgag
acaaagaaggacgattacaccgaccctatcggtcacaggcacagctataccctcacatca
acaaaggctgcaacttgcgaagctgacggcgaaaaggtatacacttgctcatgcggtgaa
aagtacactgaaactatccctgcgacaggtcacagcgaaagcacatggataatcgacaag
gcggctactgcgacagaaaatggctcaaagcacactgagtgtacaacttgcggcaaggtg
ataaagacagaggttatccctgcaactggcgaggtaagtgacaaaaaagaaactgttatc
ttcacaggctcggcaaagacatcaggctggggtcaggctatcacactttccacaaccaag
gagggcggcagttttgacagctcagttatcgaaaaggacggatattttgaagttcagttc
aagggcggcactgacaaggcggaggtcattctccagagttggtcaggcggtgcagactgg
gcgagagtttcaccaactgaggtaacagaaaaggacggcattgtatacgcaaagtacagc
tacgacgatgttgcggcggcgttcggaacaacagatttctctaaagtagaccgcttccat
gttggtgcggctaacggagatatcgaagttcttagtgttaagtatattgtcggaaagtca
acagagccggttgatccggtagatcctgttgaccctgataagccggagcaggatccatat
gtatctattttctggggtgcaaaatcatgtggctcatggggtcaggcagtttcagttatg
acttcaaaaaattatggcagttttgatgtttcgcatctctctgcaaatggctatttctat
gttgagtattcaggtgcagagaacgagcttgagcttattctccagagctggtcaggagga
gcaagctgggcaagagttcagcctagcgaaacaggcagagtgcatgatcattactatgct
aagttcacatatgcagactgtgtgaaggagcttggtacaggttttgataagctggatcag
cttcatgctgcggccaaaaacggtgatatcacagtttattctatttgctactgtacacct
gctaggtaa
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