Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00830
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Entry
RBI_I00830 CDS
T03158
Symbol
spore_III_D
Name
(GenBank) sporulation transcriptional regulator SpoIIID
KO
K06283
putative DeoR family transcriptional regulator, stage III sporulation protein D
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rus03000
]
RBI_I00830 (spore_III_D)
Transcription factors [BR:
rus03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
RBI_I00830 (spore_III_D)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIID
HTH_23
HTH_10
DUF4709
HTH_psq
HTH_28
DUF134
HTH_DeoR
HTH_11
HTH_Tnp_4
HTH_50
Motif
Other DBs
NCBI-ProteinID:
CCO04552
UniProt:
A0AAP3QK17
LinkDB
All DBs
Position
I:complement(939782..940048)
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AA seq
88 aa
AA seq
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MNGSEKERCVLLGEYVAAHRATVRCAAKEFGISKSTVHKDLTERLPKISPQLFKSVKEVL
EENKRERHIRGGIATKHKYEQQFKKAVK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgaatggatccgaaaaggaacgatgtgtgctgcttggagaatatgttgcggcacacaga
gccacggtacgctgtgcggcaaaggaatttggcataagcaaatccactgtacataaggat
ctgacagaacgtctgccgaaaatctctcctcagcttttcaaaagcgtaaaagaggtcctt
gaggaaaacaaacgtgaaagacatataagaggcggaatagcgaccaagcataaatatgaa
cagcagttcaaaaaggctgtaaaatga
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