Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00922
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Entry
RBI_I00922 CDS
T03158
Name
(GenBank) Transcriptional regulator, AraC family
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
MannoseP_isomer
Motif
Other DBs
NCBI-ProteinID:
CCO04637
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Position
I:complement(1039479..1040432)
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AA seq
317 aa
AA seq
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MGNAIKKDRITTDETLRETASHGSEEYPFSYYYEDIWDFDFHCIDWHWHPEVEFVYVQHG
KADFLVGGNRYVLSSGDGIFINSQVIHRFEAEDSAIIPNIVFSPVLLAPQGSLIYSRYIR
PIIESTTECVIFSAEETAHHSIIETMRSVFAVQGSGTASEMETVELLLKLWRLLYESIQI
TDCGPVSGHSAQTQAKLQIMMQYIHDNYSGQITLDDIAGTVLISKSSVLNIFRTYLHTSP
INYVVEYRLKRASKLLVDTENSVCTIAQETGFENIGYFCRRFKKLYGVTPINYRKYYRSA
ERNSMRNIHSDTNVLSG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgcaatcaaaaaggacaggatcacaacggacgaaaccttacgtgaaactgca
agtcacggcagcgaagaatatccgttcagctactattatgaggacatctgggatttcgat
tttcactgtatcgactggcactggcacccagaggtcgaatttgtttatgtacagcatggc
aaggctgattttctggtgggtggaaacaggtatgttctaagctcgggcgatgggatcttt
ataaattctcaggtgatacacaggtttgaagcagaagacagcgccattattccgaacatt
gttttttcacctgttctgcttgcgccgcagggcagtctgatatacagcagatacatcaga
ccgataattgaatcaactaccgaatgtgtgattttttccgccgaagaaacagcgcaccac
agcattatcgaaacaatgaggtcggtatttgctgtgcagggttctggcacggcttctgaa
atggaaacggtagaactgctgctgaaactatggcgcctgttatatgaaagcatacagata
acagactgcggccccgtgtccgggcattccgcacagacgcaggctaagcttcagataatg
atgcagtatattcatgataattacagcggtcagataacacttgatgatattgcaggaaca
gttcttataagcaaaagcagtgttctcaatattttcaggacatacctgcacacttcgccg
ataaattacgttgtggaatacagactgaaacgtgcgtcaaaactgcttgttgataccgaa
aacagcgtttgcaccatagcacaggaaacgggatttgagaacatcggctatttctgccgc
agattcaaaaagctgtacggcgttacgccgataaattacagaaaatactatcgcagtgcg
gagcgtaattcaatgagaaatatacattctgacacaaatgtcctgtcgggctga
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