Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00955
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Entry
RBI_I00955 CDS
T03158
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rus03016
]
RBI_I00955
Enzymes [BR:
rus01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
RBI_I00955
Transfer RNA biogenesis [BR:
rus03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
RBI_I00955
Prokaryotic type
Methylthiotransferases
RBI_I00955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
TRAM
Motif
Other DBs
NCBI-ProteinID:
CCO04670
UniProt:
A0ABP1WGW3
LinkDB
All DBs
Position
I:1076607..1077911
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AA seq
434 aa
AA seq
DB search
MKAFFYTFGCKVNQYETENIKEAMLSEGYEVTEDYADAEVCVVNSCTVTAQSDSKCRQLI
HKIKKANPECLIVLAGCFPQAFEKEASALDECGIIVGTGAKKEIPALIKKYITSGERIIR
IVPRERGEAFEKMTNSGADQKTRAYIKIQDGCDQYCTYCIIPTARGHICSKPLEDIAPEV
QQLVDSGHKEIILTGINLCCYGRDFKNGTRLIDAVEAACGCDGDYRVRIGSVEPELISDE
DILRMSKLEKLCPHFHLSLQSGCDETLKRMNRHYDTVEYAELCEKLRRHFPNCAITTDIM
VGFPQETDEEFEKSLAFAKKISFAETHIFPYSRRPTTVADKMKGQLDRKTKHSRAAQMAD
VCNETKALYLKSLVGTVQEVLFEKETSPQWHQGHAPNYVTVKIPRDSEDVSLRRQLLKIE
ITSSDGEFCYGKLI
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcctttttctatacattcggctgcaaggtaaaccaatatgaaactgaaaatata
aaggaagcaatgctgtccgaggggtatgaggtcactgaggattatgctgatgcagaggtc
tgtgttgtaaattcctgcactgttaccgctcagtcggactcaaaatgccgacagcttatc
cacaagataaaaaaagccaatcctgagtgtctgatagttttggcaggctgttttccgcag
gcttttgaaaaggaagcttctgctcttgacgagtgcggtatcatagttggcacaggtgca
aaaaaggagatacctgcccttataaaaaagtatatcacaagtggcgagcgtattatcagg
atagttcctcgtgagaggggagaggcttttgagaaaatgacaaactcaggtgctgaccaa
aaaactcgtgcgtatatcaaaattcaagacggctgtgatcagtattgcacctactgtatt
atccccactgcgagaggacacatctgctcaaaacctttggaggatatcgctcctgaagtt
cagcagctcgttgactcaggtcataaggagataatcctcacgggcataaatctttgctgt
tacggcagagacttcaaaaacggcacacggctcattgacgctgttgaagccgcttgcggc
tgtgatggcgattacagagtgcgtatcggctctgttgagcctgagcttatttcagatgaa
gatattctgcgaatgtcaaagcttgaaaagctctgtccgcattttcatctttccctgcaa
agtggctgtgacgaaactttgaagcgcatgaatcgccattatgatacggtggagtatgct
gagctttgcgagaagcttcgcaggcattttccaaactgcgctataaccaccgacataatg
gtgggctttccccaggaaactgacgaggaatttgaaaagtcgctggcatttgcaaagaag
atatcttttgcagaaacgcatattttcccgtattcacgcagacctaccactgttgccgac
aaaatgaaaggtcagctcgaccgcaagaccaagcacagtcgtgcggctcaaatggcagat
gtatgtaacgaaacaaaggctttgtatctcaaaagccttgttggcacagtgcaagaggtt
ttatttgaaaaggaaacaagccctcagtggcatcagggtcatgcaccaaattatgttact
gtgaaaattccaagggacagcgaggacgtttctttgcgccgacagcttttaaagatagag
ataacctcgtcagatggcgagttttgttacggaaaacttatatga
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