Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00963
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Entry
RBI_I00963 CDS
T03158
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBI_I00963 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rus03400
]
RBI_I00963 (recO)
DNA repair and recombination proteins [BR:
rus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RBI_I00963 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RBI_I00963 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
CCO04678
UniProt:
A0ABM9QFL4
LinkDB
All DBs
Position
I:complement(1086580..1087362)
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AA seq
260 aa
AA seq
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MPHTEKRILTMLTFMGLILRENDRGETSKSVTVLTAERGVIDIFVRGGRKSTKNASSTQL
FAYSKLCVEEKKNAKDQSMFFLNSSESEKLFYNIRLDPKKTALASYFSELLMYIRTEESG
CDEIMRLTLNTLYFLDKGDRDNELLKSIFEFRLLCEAGLRPALLGCSVCMAYEADIMHFN
LSTGVLECDKCCYNPDSIYDIELDRTMLYIVRFIALTEYERLFAFKISERYQKKLTAFTE
RFVRYNLKGKFPSLDFYRLL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacacagaaaagaggatactgacaatgctgacctttatgggactgatactgagg
gaaaatgacaggggcgaaacaagcaaatccgtcactgtcctcacagcagagcgtggagtc
atagatatatttgttcgtggaggcaggaaaagcacgaaaaatgcgtcatcaacgcagctt
tttgcatactctaagctgtgcgttgaggaaaaaaagaacgctaaagaccaatcaatgttt
tttctcaacagcagtgaatcagagaagcttttttacaatatcaggctcgaccctaaaaaa
acggctcttgcctcttacttttctgagcttctcatgtatatacgaacagaggaaagcggc
tgtgacgagataatgcggctgacgctgaacacactttattttctcgataagggcgacagg
gataacgaacttctcaaatctatatttgagtttcgtctgctgtgtgaagcaggattaaga
cctgcgcttcttggctgttcggtttgcatggcgtatgaagctgacattatgcacttcaat
ctgtcaacaggggtcttggagtgtgacaaatgctgttacaatcctgacagcatttacgat
attgaattagacaggactatgctatacatagtccgatttattgcactgacagaatatgag
cggctttttgctttcaagataagcgaaagatatcagaaaaaactgacggcttttacagag
cggtttgtgagatataatctgaaaggcaagtttccgtcgcttgatttttacagacttttg
tag
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