KEGG   Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01004
Entry
RBI_I01004        CDS       T03158                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
rus  Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RBI_I01004 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rus03021]
    RBI_I01004 (rpoZ)
   03400 DNA repair and recombination proteins [BR:rus03400]
    RBI_I01004 (rpoZ)
Enzymes [BR:rus01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     RBI_I01004 (rpoZ)
Transcription machinery [BR:rus03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     RBI_I01004 (rpoZ)
DNA repair and recombination proteins [BR:rus03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      RBI_I01004 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: CCO04719
UniProt: W0U5B6
LinkDB
Position
I:1127476..1127685
AA seq 69 aa
MMLRPAVSQILKNNESYYSLVIAVAKRAREITSDAFDNKLVLDEKPVKTAVDELYNGEYK
IIEDPSLRK
NT seq 210 nt   +upstreamnt  +downstreamnt
atgatgcttagaccggccgtaagccagattttgaagaacaatgaaagctattattctcta
gttatcgcagttgcaaagagagcaagagagatcacaagcgacgcttttgacaacaagctg
gtgcttgatgaaaagccagtaaagacagcagttgacgagctttataatggcgaatacaag
ataatcgaggatccaagcctcagaaaataa

DBGET integrated database retrieval system