Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01069
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Entry
RBI_I01069 CDS
T03158
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00300
Lysine biosynthesis
rus00470
D-Amino acid metabolism
rus01100
Metabolic pathways
rus01110
Biosynthesis of secondary metabolites
rus01120
Microbial metabolism in diverse environments
rus01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBI_I01069 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBI_I01069 (lysA)
Enzymes [BR:
rus01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RBI_I01069 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
PSI_PsaH
Motif
Other DBs
NCBI-ProteinID:
CCO04783
UniProt:
A0AAN2TBQ7
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All DBs
Position
I:1201177..1202451
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AA seq
424 aa
AA seq
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MKTPFITKEKAEEIIKQYPTPFHIYDEKGIRQRARDLYKAFSWNKGFKEYFAVKATPNPF
ILKILKEEGCGVDCSSLTELMMSDCCGFSGSDIMFSSNVTPKADFLKARELGAYINLDDF
THIDYLDDLCGIPETICCRFNPGGHFEIETQIMDNPGEAKYGFTREQLFEGFKVLQQKGA
KHFGLHAFLASNTVSNAYYPKLARILFELAVELHEKTGADIKFVNLSGGVGIAYEPDKPQ
NDIFAIGEGVRKAFEDIMVPAGLGDVAIFTELGRYMLAPFGHLVATCTHHKHTYKEYVGL
DACACNLMRPAMYGSYHHITVLGKENAPCDHKYDVTGGLCENNDKFAIDRMLPEIDTGDI
IVIHDTGAHGFSMGYNYNGKLRSAEILLHEDGSFDMIRRAETPADYFATFDFTDIFDKYT
KNNK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaccatttataaccaaggaaaaggctgaggagataatcaagcagtatcctaca
ccttttcatatctacgacgaaaagggtatcagacagagagccagagatctttacaaggca
tttagctggaacaaaggcttcaaagagtatttcgctgtaaaggctactcctaacccattc
attttgaaaatactcaaggaagagggctgcggcgttgactgttcttctcttactgagctt
atgatgagcgactgctgcggattcagcggaagcgacatcatgttttcttcaaacgtaact
ccaaaggcggattttctcaaggcaagagagcttggcgcttatatcaaccttgacgatttc
acacacatagattatcttgacgacctttgcggtattcctgaaactatctgttgccgtttc
aatccgggcggacatttcgagatagaaactcagataatggacaaccctggtgaggctaag
tacggcttcacaagagagcagctttttgagggcttcaaggtacttcagcagaaaggcgca
aagcatttcggacttcacgctttccttgcttcaaacactgtttcaaacgcttattatcca
aagcttgcaagaatacttttcgagcttgctgttgagcttcatgaaaagacgggtgcagac
atcaagttcgtaaacctttcaggcggtgttggtatagcatatgagcctgacaagccacag
aacgatatcttcgctatcggcgagggcgttcgcaaggcatttgaggatataatggttcct
gctggtcttggtgacgttgctatcttcacagaacttggcagatatatgctcgctccattc
ggtcatctcgttgctacctgcacacatcataagcatacttataaggagtatgttggactt
gatgcttgtgcctgcaaccttatgcgtcctgctatgtacggttcatatcatcacattaca
gttcttggcaaggagaacgctccgtgcgaccacaagtatgacgtaactggcggtctttgc
gagaacaacgataagtttgcgatcgacagaatgttgcctgagatagacactggcgatata
atcgttatccacgatacaggcgcacacggtttctcaatgggttataactacaacggaaag
ctccgttcagcagagatacttctccacgaggacggctcattcgatatgataagacgtgcc
gaaactcctgctgactatttcgcaacatttgatttcactgatattttcgataaatataca
aagaataataagtaa
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