Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01146
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Entry
RBI_I01146 CDS
T03158
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rus03019
]
RBI_I01146
Messenger RNA biogenesis [BR:
rus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RBI_I01146
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_28
AAA_18
CoaE
IIGP
AAA_29
AAA_16
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
CCO04859
UniProt:
A0AAW6EDQ0
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All DBs
Position
I:1290234..1291091
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AA seq
285 aa
AA seq
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MQFVIITGMSGSGKSSAVNVLEDIGYYCVDNMPPELIPKFANICSQSDGKIDKVAFVVDI
RGGDLFLKLQDTVKQLQGEGVSLKILFLDSSDDVIVRRYKETRRKHPLDEVSYGNIRKAI
ETEREILRPIKAQADFYIDTSRSSTAQFKERLYSIFLGNNEFMHIDVQSFGFKFGAMSEG
DLVFDVRCLPNPFYVPELKNKTGLDKDVYDYVLSFDEAKVLLGKLTDLIDYLIPLYEKEG
KSQLVIAFGCTGGKHRSVTFAEAVAEHLRKQGHRIRITHRDINNQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgtgataattactggtatgtcaggatcgggaaaatcaagtgccgtgaatgtg
cttgaagatataggatattactgcgttgataatatgccgcctgagcttatcccaaagttt
gcaaacatatgcagtcagtctgacggaaaaatagacaaggtagcgtttgttgttgatata
agaggcggcgacctttttctgaagcttcaagacacagtaaagcagcttcagggcgagggc
gtgagtcttaaaatacttttccttgacagctcagatgacgttatcgtgagaagatacaag
gaaacaagaagaaagcaccctcttgacgaggtgtcatatggaaacataagaaaagctatt
gaaactgagcgtgagatattaagacctataaaagcacaggctgatttttatatagacacg
tccagaagctcaacagctcaatttaaggaaaggctttattcaatatttcttggaaacaac
gagtttatgcatattgatgttcagtcgttcgggttcaagttcggtgcaatgagcgagggc
gaccttgtatttgacgtaaggtgtctgcctaatccgttttatgtacctgagcttaagaac
aaaacaggtcttgacaaggacgtttatgattatgttttgagctttgacgaagccaaagtg
cttctaggcaagctaacagatcttatcgactatctcatacctctttacgaaaaagagggc
aagtcacagcttgttatagcgttcggctgtacgggcggaaagcataggagcgttaccttt
gcagaagcagttgcggagcatctgagaaagcaaggtcacaggataagaataacacacaga
gatataaataatcagtaa
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