Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01171
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Entry
RBI_I01171 CDS
T03158
Symbol
speA
Name
(GenBank) Arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00330
Arginine and proline metabolism
rus01100
Metabolic pathways
rus01110
Biosynthesis of secondary metabolites
Module
rus_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RBI_I01171 (speA)
Enzymes [BR:
rus01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
RBI_I01171 (speA)
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Motif
Pfam:
OKR_DC_1
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
OKR_DC_1_C
Beta_elim_lyase
Cys_Met_Meta_PP
SepSecS
Motif
Other DBs
NCBI-ProteinID:
CCO04884
UniProt:
A0ABP1WLL5
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All DBs
Position
I:1316770..1318170
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AA seq
466 aa
AA seq
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MRNRVVRLDVPGHKGGRMNKELRDFLGVDCLKCDVNSMKPLDNLCHPVSVIKDAEMLAAE
AFGAKHAFFIVNGTTAAVQTMIFTSCKAGDKIIMPRNVHRSAINALVVCGAIPVYVNPGT
NKQLGIPLGMSVKDVEKAIKENPDAKAVLVNNPTYYGICSDIKSIVKLAHEHGMLVLADE
AHGTHLYFGEGLPCSAMAAGADMAAVSIHKTGGSLTQSSLLLCADTVSEGYVRQIINLTQ
TTSGSYLLMVSLDLARKNLALNGKELFKKAVDYADYAREEINKIGGYYAFGRELENGDDI
FAFDSTKLSVHTRAMGLAGVEVYDILRDDYDIQIEFGDIGNILAIVSAGDRELEIERFIS
ALSEIKRLYSKDPSGMFDHEYINPIVEIPPQQAFYSEKKSVPIEESNGMICGEFVMCYPP
GIPILAPGEKITSDILNYIAYCKEKGCFLTGTEDLEINNINVVVNS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacagagtggtgcgtcttgacgtacctggtcacaagggcggaagaatgaataaa
gagcttcgtgactttttgggcgtggattgtctgaagtgcgatgtgaactccatgaagcca
cttgacaacctttgtcaccctgtttctgtgataaaagatgctgaaatgcttgccgctgag
gcttttggtgcaaagcacgctttctttatagtaaatggtactactgctgcagtccagacg
atgatatttacaagctgtaaggcaggagataagataataatgccgagaaacgttcacaga
agtgctatcaatgcacttgttgtgtgcggtgctatacctgtttatgtaaatccaggcaca
aacaaacaacttggaatacctcttggaatgtccgttaaggacgttgaaaaagctatcaag
gaaaatcctgatgcaaaggctgttttggtgaacaacccgacttattacggaatttgctct
gatataaaaagcatcgtcaagcttgcccatgagcatggtatgttggtgcttgcggacgaa
gcacatggcactcacctttattttggtgagggtctgccttgctctgcaatggcggcagga
gcggatatggcggcagtatcaatacacaaaacaggaggaagcctaacgcagtcatcgctc
cttctttgtgcagacactgtttcagagggttacgtaagacagataattaacctcactcag
accacaagcggctcttatctgcttatggtatcccttgaccttgcaagaaaaaatcttgcg
ctcaacggcaaggaactttttaaaaaggcagttgactatgccgattatgcaagggaagag
ataaataagataggtggctattacgctttcggtcgggagcttgaaaatggtgatgatatc
ttcgcatttgacagcacaaagctttctgttcacacaagagccatgggattggcaggcgtt
gaggtctatgacattctccgtgacgattacgacattcagatagagttcggtgatatcgga
aatatacttgctatagtttccgcaggagatagagagcttgagatagagcgttttatatcc
gcactttccgaaattaaaaggctttattcaaaagacccgtcaggaatgtttgaccacgaa
tatatcaatcctatcgttgagataccgccgcagcaagctttctacagcgagaaaaaatca
gtgcctatagaagaaagcaacggtatgatatgcggagagtttgttatgtgctatcctccg
ggaatacctatccttgcccctggtgagaagataacttccgacatacttaattatatcgca
tactgtaaagaaaagggctgttttcttacaggtacggaggatcttgagataaacaacata
aacgtagtggtaaattcatag
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