Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01204
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Entry
RBI_I01204 CDS
T03158
Symbol
trpA
Name
(GenBank) Tryptophan synthase alpha chain
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00260
Glycine, serine and threonine metabolism
rus00400
Phenylalanine, tyrosine and tryptophan biosynthesis
rus01100
Metabolic pathways
rus01110
Biosynthesis of secondary metabolites
rus01230
Biosynthesis of amino acids
Module
rus_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RBI_I01204 (trpA)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
RBI_I01204 (trpA)
Enzymes [BR:
rus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
RBI_I01204 (trpA)
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Gene cluster
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Motif
Pfam:
Trp_syntA
PcrB
His_biosynth
BtpA
DUF4250
Motif
Other DBs
NCBI-ProteinID:
CCO04917
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Position
I:complement(1347758..1348549)
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AA seq
263 aa
AA seq
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MKNRIDACFEKLKAENKKALVTFITAGDPDMDTTEKCVLEMYKNGSDIIEIGVPFSDPIA
EGATIQKASLRSLSGGTNLDKIFDLVRKLRTQTDKPMLLMMYINTIFRFGTAKFFELCKE
TQIDGVIVPDMPFEEREELEGEAEKNGIYTIFLVAPTSHERVKMIAEKSKGFLYVVSSLG
VTGMRSEITTDFNELLAPIRNNDHCPCCIGFGISNPEQAKKMSQYADGVIMGSAVVKIVE
EHGKDAPEYVGKFIKSVREGMDS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataggatagacgcttgttttgaaaagcttaaagcagaaaacaaaaaggcgctt
gtgacatttatcaccgcaggcgatcctgatatggatacaacagaaaagtgcgttcttgaa
atgtataaaaatggttctgacattatcgagatcggagtgccgttctctgaccctatcgca
gagggtgcaactattcagaaagcttctctgcgttctctgagcggcggaacgaatcttgac
aagatatttgaccttgtaagaaaactccgcacacagactgacaagcctatgcttctgatg
atgtatataaacactatcttcaggttcggtacagcaaagttctttgagctttgcaaagaa
actcagatagacggcgttatcgttccagatatgccttttgaagaacgtgaagagcttgag
ggcgaggctgagaaaaatggtatctacactatcttccttgttgcaccgacttcacacgag
cgtgtaaaaatgatagcagaaaagtcaaagggctttttgtatgttgtatcttcactgggc
gttactggtatgcgctctgagataacaacagacttcaacgagttgcttgcacctatccga
aacaacgatcactgcccttgctgcataggtttcggaatttcaaatcctgagcaggcaaag
aaaatgtcccagtacgctgacggcgttatcatgggaagtgctgttgttaaaattgttgag
gaacacggcaaagacgctcctgaatatgttggcaagtttatcaagtctgttcgtgagggc
atggacagctaa
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