Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01269
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Entry
RBI_I01269 CDS
T03158
Symbol
capD
Name
(GenBank) polysaccharide biosynthesis protein CapD-like
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
CoA_binding_3
RmlD_sub_bind
3Beta_HSD
adh_short
Shikimate_DH
CoA_binding
C2185-like_N
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
CCO04981
UniProt:
A0ABM9QGG0
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Position
I:1412590..1414698
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AA seq
702 aa
AA seq
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MEKTSENTVQVWKNKKIKHWMLIAFFLCFYDIVAVNLSYIFGLFIRFDLTFSAIPKEYML
AYVKFAPIYTAFCVVVFFVFKLYNSLWRFASIGELSRIFLASIVTTIFQAVGITLLFMRM
PVAYYIVGAGTQFVLITAVRFAYRYVTLLRAKQVTNQVAVHNAMVIGAGASGQMILKELT
MSERANARPLCIIDDNPNKWGRNIGGVPIVGGRDCIMESVKKYNIDQILFAIPTASPENK
RDILNICKETGCEMKQLPGVYQITNGEVLLSKMKPVAVEDLLGREPIRVNMDEIFQHLKG
KTILVTGGGGSIGSELCRQIAGHEPKQLIIFDIYENNAYEIEQELKRKYGSKLNLVTLIG
SVRDSRRINDVFEKYKPDIVYHAAAHKHVPLMETSPNEAIKNNVVGTYKTAYVALKHGTK
RFVLISTDKAVNPTNIMGASKRLCEMVIQSMDAISKAGRTDLLPMLHAHVDEMTDGMLEN
DPIDEIAVDNIESSEAVKIESVGNKDRNGTQFVAVRFGNVLGSNGSVIPLFKKQIEAGGP
VTVTHPDIIRYFMTIPEAVSLVLQAGTYAWGGEIFVLDMGAPVKIDTLARNLIRLSGYKP
DVDIKIVYSGLRPGEKLFEEKLMAEEGMMKTDNELIHIGKPIPFDTETFLGQLGELARAS
YNNDENIVEMVEKIVPTFNPVGDKPTGNEKYGRNDVAVSAAK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacaagtgaaaacacagttcaggtgtggaaaaacaaaaagataaaacattgg
atgcttattgcattctttctgtgtttctatgatattgttgccgtaaatctatcctacatt
ttcggacttttcatcagatttgaccttactttttctgcaataccaaaggagtatatgctt
gcctatgtaaagtttgctccaatatatacagctttctgtgttgtggtgttttttgtgttc
aagctttataatagtttgtggagatttgctagcattggcgaactgtcaaggatatttttg
gcctcgatagttactaccatattccaggctgtgggtataacattactcttcatgagaatg
cctgtggcttactatatagtaggagcgggaactcagttcgtgcttataacagcagtgcgt
tttgcctatagatatgttacccttttaagagcaaaacaggtaacaaatcaggtggcagtg
cataatgcaatggtcattggtgcaggtgcttcgggtcagatgatccttaaagagcttacg
atgtcagaacgtgcaaatgcaagaccactctgcataatcgatgataacccaaataagtgg
ggaagaaatatcggaggagttcctatcgtcggtggccgtgattgcattatggaaagcgtc
aaaaagtataatattgatcagatcctttttgcaattccaactgcatcacctgagaacaaa
agggatatccttaatatttgtaaggaaacaggctgtgagatgaaacagcttccgggcgtt
tatcagataacaaatggtgaggtgcttctcagcaagatgaagcctgttgcggtcgaggat
ctgcttggaagagagcctatcagagtaaacatggacgagatattccagcaccttaagggt
aagaccatattggtaacaggtggcggtggctctatcggaagcgagctttgccgacagata
gcaggtcatgagcctaaacagcttatcatatttgacatttatgaaaacaatgcttatgaa
atagagcaggagctaaaacgtaaatatggcagtaaactcaatcttgtgacgcttatcggc
tctgttcgtgacagcagacgtatcaatgacgtttttgaaaaatacaagcctgatatcgtt
tatcacgctgcagcacataagcacgttccgcttatggaaacaagccctaatgaagctatc
aaaaacaatgttgttggtacatacaagacagcctatgtagctttgaagcatggcacaaag
aggtttgtgcttataagcaccgataaggctgtaaaccctactaatattatgggtgcaagt
aaaagactctgcgaaatggtcatccagagcatggacgctatcagcaaggcaggcagaact
gatcttctacctatgctccatgcacacgttgatgaaatgacagacggtatgcttgagaac
gatccgatagacgagatagctgttgataatatagagagcagtgaagcggttaagatcgaa
agcgttggcaataaggacagaaatggcacacagtttgttgcagttcgttttggaaacgtt
cttggaagcaacggctctgtaatcccactgttcaaaaagcagatagaagcaggcggtcct
gttacagttactcaccctgatatcataagatatttcatgactatacctgaggctgtgagc
cttgttcttcaggcaggcacatacgcatggggcggcgagatatttgtccttgatatgggt
gcgcctgtgaagatagacacacttgcgagaaatcttatcagactttcaggatataagcct
gatgtagatatcaagatagtttactcaggtctgcgtcctggcgagaagctttttgaggag
aagcttatggcagaggagggcatgatgaaaacggataatgagcttatccatatcggaaag
cctataccgtttgacacagaaacgttccttggtcagcttggggagcttgctcgtgcaagc
tataacaatgacgaaaatatcgttgaaatggtcgaaaagatcgttccaacattcaatcct
gtaggtgataaaccaacaggtaatgaaaaatatggcagaaacgatgttgcagtttctgcg
gcaaaataa
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