Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01313
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Entry
RBI_I01313 CDS
T03158
Name
(GenBank) site-specific recombinase
KO
K06400
site-specific DNA recombinase
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
RBI_I01313
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
Filament
zf-Mss51
Ogr_Delta
DUF4200
Laminin_II
CENP-F_leu_zip
Motif
Other DBs
NCBI-ProteinID:
CCO05025
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All DBs
Position
I:1464173..1465843
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AA seq
556 aa
AA seq
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MNREGKKCVLYPRVSTEMQVDGYSLEGQKNGLKRFADREEMEIVGIYEDAGKSGKSIEGR
PAFKKMLSDIKNGLEIDYILVYKLSRFGRNAADILNSLEFVQSYGINLICIEEGIDSSQT
SGKLLISVLSAVAEIERENIIEQTMNGRREKARQGGWNGGFAPYGYYLKDNQLLIEETEA
EAIRIIFDKFANSDIGLGGVAKYLNLQGIKKIPRQNGTLETWSSHFIRLILDNPVYCGKI
AYGRRTREKVKGTKNEYKQVHAEDYILEDGQHEGIISEELWQKVHAKRMATGIKQPSKIG
KDRSHLLTGILKCPLCGSSMYTNKHAWTNKDGTYKEVYYYICGRNKQERGHHCDYKASLR
KTDIEPLVIEAVKELVSDKYFAKEIEKRIGVQNDTTAIDKELANYESKLKEVDLNKARLE
REIDNLPIDARFRERKIHDMTLRLDALYDTIVELEERIEDAKLRKSSIEMETITLDNIYK
LMLNFGKLYDIISDEEKKSLITYLIKEIQIYPNGESEQPLKSIEFNFPIYRDGQEVRRLL
WEKGNTVETVCLLSRK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagaaggaaagaaatgtgtcctgtatccgagagtaagtaccgaaatgcaggta
gacggatatagccttgaaggacaaaaaaacggattaaaacgatttgctgaccgagaagaa
atggaaattgtcggtatctatgaggatgcgggtaaatcaggaaaatctattgaaggacgc
cctgcatttaagaaaatgctttccgatataaaaaacggattggagatagactatattctg
gtttataaactttcccgtttcggaagaaatgcagcggatattctaaattcattagagttt
gtacaatcttatggaataaatcttatttgtattgaagaaggaattgactcgtcacagaca
agtggaaaacttttaatctctgttttgtctgcggttgcagaaatagaaagagaaaatatc
attgaacagacaatgaatggacggagagaaaaagcacgacaaggtgggtggaatggtgga
tttgcaccatacggatattatctgaaagacaatcagctcttgatagaagaaacggaagct
gaagcaatcagaattatatttgataaatttgctaattctgatataggacttggcggagta
gcaaaatatcttaatcttcaaggtataaagaagatacctcgtcagaacggcacattggaa
acttggagcagtcattttatacggttgatattagacaatcctgtttattgtggaaagatt
gcttatggcagaagaacacgagaaaaggtaaaaggtacaaaaaatgaatataagcaggtt
catgcagaggattacattctggaagatggacaacatgaaggaattatcagcgaggaattg
tggcaaaaggttcacgcaaagcgtatggcaacaggaattaaacagccatccaaaatcggt
aaggataggtcacaccttttgacggggatattaaagtgtcccctttgtggaagttcaatg
tatacgaacaaacacgcttggacaaataaagacggcacatacaaagaggtttactattat
atttgtggtagaaataagcaggagcgaggacatcattgtgattataaagcatcgctaaga
aaaacagatattgagccacttgtaattgaagctgttaaggaattggtaagcgataagtat
tttgcaaaagagattgaaaagcgtattggcgtacagaacgatacaacagctattgataag
gaacttgccaattacgagagtaagctgaaagaagtagatttgaataaagcccgtctggaa
cgagagattgataatctgcctattgatgctcgtttcagagaaaggaaaatccacgacatg
actttaagacttgatgccttgtatgatacgattgtagagttggaagaacggattgaagat
gcaaagctgagaaaaagttctatcgaaatggaaacaatcactctggacaatatttacaag
cttatgctgaattttggaaagctctatgatataataagtgacgaggaaaagaaaagcctt
attacttatctcataaaagaaattcagatatatccaaatggggagtcagagcagcctttg
aagtcaatagagtttaatttcccaatatatcgggatggtcaagaggtaaggcggctcttg
tgggaaaaaggtaataccgttgagacggtttgtttgctgtcaagaaaataa
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