Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01344
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Entry
RBI_I01344 CDS
T03158
Symbol
crtE
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00900
Terpenoid backbone biosynthesis
rus01100
Metabolic pathways
rus01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RBI_I01344 (crtE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rus01006
]
RBI_I01344 (crtE)
Enzymes [BR:
rus01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RBI_I01344 (crtE)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RBI_I01344 (crtE)
2.5.1.29 geranylgeranyl diphosphate synthase
RBI_I01344 (crtE)
Prenyltransferases [BR:
rus01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RBI_I01344 (crtE)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CCO05056
UniProt:
A0AAW5KG27
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All DBs
Position
I:1499010..1499903
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AA seq
297 aa
AA seq
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MNDMNKATLDYYVELIDNKLLELTRSKPELQGQVVEAMEYSLQAGGKRLRPVLMLEFCRM
CGERQPEKYAEIACSIELIHTFSLIHDDLPCMDDDDYRRGKPSCHKAFPENIALLAGDAL
NTLAFEVIANSAMNGVISADKAVMLISVLARAVGTDGMIGGQVIDLKYENKEIDVDTLNI
LQTCKTGALIEAACVMGVILGDKLEAIPFAADYAQAMGRAFQIVDDILDVTGTFEELGKP
IGSDSEQHKNTYVSLLGLDKSEQIAKQLTVQALGHLKYFEDSVFLTELTSDMLTRRS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatatgaacaaagccacacttgattattatgtggagcttatagataataaactg
ctggagcttacccgctcaaagcctgagcttcagggtcaggtagttgaggctatggagtat
tctttgcaggcaggtggcaaaaggctcagacctgtgcttatgcttgaattttgccgtatg
tgtggcgagcgtcagcctgagaagtatgcagagatagcttgttctattgaactcatacac
actttttctcttatacacgacgatctgccttgtatggacgatgatgattacagacgtgga
aagccctcatgtcataaagcttttcctgaaaatatcgcactccttgcaggtgatgcactg
aatacccttgcttttgaggtcatagccaacagtgccatgaacggcgttatatctgccgac
aaggccgttatgcttatctctgttctggcaagagcagtaggcactgacggcatgataggc
ggtcaggtgatagaccttaaatatgaaaataaagaaatagatgttgatacactgaatatt
ttgcagacctgcaaaacaggcgcacttattgaagccgcttgtgtaatgggcgttattctc
ggcgataagcttgaggctatcccctttgcggcagactatgctcaggcaatgggcagagca
tttcagatagttgacgatatccttgatgtaacaggcacttttgaggagcttggcaagcct
atcggcagtgacagcgaacagcataaaaacacatatgtatccctccttggacttgacaag
tcagaacagatagcaaaacaactgacagttcaagcactgggtcatcttaaatattttgag
gacagcgttttcctcacagagcttacatctgatatgcttacaagaagaagttga
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