Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01399
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Entry
RBI_I01399 CDS
T03158
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBI_I01399 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rus03400
]
RBI_I01399 (ung)
Enzymes [BR:
rus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RBI_I01399 (ung)
DNA repair and recombination proteins [BR:
rus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBI_I01399 (ung)
Prokaryotic type
RBI_I01399 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CCO05111
LinkDB
All DBs
Position
I:complement(1559420..1560031)
Genome browser
AA seq
203 aa
AA seq
DB search
MKLREFLKYEYSHFTVYPDMHDIFNSLKYTPYEKVKAVIIGQDPYHGPGQAHGLCFSVKA
GVNPPPSLQNIFKELNADLGISIPNNGELTDWAKQGVLMMNTVLTVRQGQPNSHKGKGWE
QLTDAVIKKLNERNVPTAFILWGGNAKAKAPLITNPIHAVFKAAHPSPLSAYNGFFGCRH
FSKVNDFLVSNNIQPIDWTISNK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactccgtgaatttttgaaatacgaatattcacacttcactgtttatcctgatatg
catgatatcttcaattcattgaagtacacgccttatgaaaaagtcaaggctgttatcatt
ggacaggatccttaccatggtccgggacaggctcatggtctttgtttttccgttaaagct
ggtgttaatccaccaccgtctttgcagaatatttttaaagaacttaatgctgatcttggt
atctctatccctaataatggtgagcttaccgattgggctaagcagggtgtgctgatgatg
aacactgttcttactgttcgtcagggtcagcctaattctcataagggtaaaggctgggaa
cagcttactgacgctgtaataaaaaagcttaatgagcgtaatgtgcctactgcgtttatc
ctttggggtggcaatgctaaggctaaggcaccacttataacgaaccctattcatgcagta
ttcaaggcagctcatccatctccattgtctgcgtataatggttttttcggatgcaggcat
ttttctaaggttaacgatttccttgtaagtaacaatattcagccaatagattggacaata
agcaataagtaa
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