Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01400
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Entry
RBI_I01400 CDS
T03158
Name
(GenBank) conserved hypothetical protein
KO
K03733
integrase/recombinase XerC
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rus03036
]
RBI_I01400
Chromosome and associated proteins [BR:
rus03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RBI_I01400
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
CCO05112
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All DBs
Position
I:1560610..1561590
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AA seq
326 aa
AA seq
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MKQAYVDDCPYYLDDFLTNMKVVKDRSDRTEEAYFIDIRTFLRYLNVKHHAVPAETPFNK
IKIKETPIEWLECFSLNDAYVYLKYLKDERNNSTKTRARKCSALKQFYVYLCQKAKLISN
NPLDDLELPHINQALPKYLSLEQSLELLRNIDSKNQVRDYCIITLFLNCGMRLSELVGLN
LSDYSRDNRTLRVLGKGRKERIIYLNDACVSALDEYIDTTRPHVEQTAIFLSANKTRINK
RRVQQIVDEQLQRAGLSNLGITTHKLRHTAATLMYQHGGVDTLVLKDILGHKSIATTEIY
THLSDENIKKAMESNPLSEEIEKKKK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagcatatgtagatgattgcccatattatcttgacgattttctaactaacatg
aaggttgtcaaagaccgttctgaccgcactgaagaagcttattttattgatatccgaaca
tttctgcgatatcttaatgtcaaacaccatgcagttccagccgaaacgcctttcaataaa
ataaaaataaaagaaacgccaatagaatggctcgaatgcttttcactaaacgatgcttat
gtttatttaaagtatctcaaagatgagcgcaataattccacaaaaacccgtgcgagaaaa
tgttcagctttgaaacaattctatgtttatctttgccaaaaagccaagctcatttcaaac
aatccgcttgatgatcttgaattgccacatataaatcaagccttgcctaaatatctgtcc
cttgaacaaagccttgagcttctgcgtaatatcgactctaaaaaccaggtgcgtgattat
tgtatcattactctgttccttaactgcggtatgcgtctgagcgagcttgtgggcttgaat
ttaagcgattacagccgagataacagaactctgcgtgtcctcggcaaaggccgcaaggag
cgcattatttaccttaacgacgcttgtgtttctgcacttgatgagtatattgacactacc
cgcccccacgtggaacaaactgccatttttttgtcggctaacaaaacaaggataaacaag
cgacgtgttcaacaaatagtagatgaacagctccaacgtgcaggacttagcaatttgggt
attaccacccacaagctcaggcatacagccgcaaccctaatgtaccaacacggcggtgta
gatactcttgtactgaaagatatactcggtcacaaaagcattgcgaccactgagatatac
acacatttatctgatgaaaacatcaaaaaggccatggagtcgaatccattgtctgaagaa
attgaaaagaaaaagaagtaa
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