Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01420
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Entry
RBI_I01420 CDS
T03158
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00230
Purine metabolism
rus00240
Pyrimidine metabolism
rus01100
Metabolic pathways
rus01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RBI_I01420 (nrdD)
00240 Pyrimidine metabolism
RBI_I01420 (nrdD)
Enzymes [BR:
rus01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
RBI_I01420 (nrdD)
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Gene cluster
GFIT
Motif
Pfam:
NRDD
ATP-cone
Gly_radical
YjjI-like
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
CCO05132
UniProt:
A0AAP3VP88
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Position
I:complement(1578682..1580940)
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AA seq
752 aa
AA seq
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MIIKIKKRDGRTVTFNIEKIAGAIYKAAQSVGKDNYEEALELSGKVVDKLMEKHLDMPTV
EEIQDCVERVLIEEGMADTAKSYILYRSNRTRAREMNTRLMKVYEDLTFQSAKDNDLKRE
NANIDGDTAMGTMLKYGSVGAKEFNEMYVLAPEHSKAHQEGDIHIHDLDFYTLTTTCTQI
DLTKLFDKGFSTGHGFLRTPNDIQSYAALACIAIQSNQNDQHGGQSLPKFDYDMAEGVRK
TFRHRYRDNIGRGLALLGEVSDAQSIAKKITEMLDEQGLKITLANDNGYQEAEAQFLVNF
VDAPIVKKIQSFAYKNSLKETDRATYQAMEALIHNLNTMNSRAGAQTPFSSINYGTDTSI
EGRLVIKNILLAEEAGLGNGETPIFPIHIFKIKEGVNFDPDDPNYDLFKLACRVSAKRLF
PNFSFIDAPFNLQYYKEGNPDTEIAYMGCRTRVIGNAYDPTREIVTGRGNLSFTTINLPR
LGIKAQRNIGAFFDSLDELMDLCIDQLMHRFKIQCSKRVRNYPFLMGQGIWLDSEKLTAD
DTLEEVLKHGTLSVGFIGLAECLKVLTGKHHGESEEARELGLEIISRMRARMDEETKRTG
LNFSLLATPAEGLSGRFVKMDRERYGEIAGVTDREYYTNSFHVPVYYPITAFEKLKIEAP
YHALTNAGHISYIELDGDPLNNLSAFEKVVRYMKEVGIGYGSINHPVDRDPVCGYTGIIG
DKCPKCGRSEAEHSKVIHERIPRAKACCEGDN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgataatcaagataaaaaagcgtgacggacgtactgtaactttcaatattgagaaaata
gctggcgctatatacaaggcggctcagtctgtgggcaaggataactatgaggaagctttg
gagctttcgggtaaagttgttgataagcttatggaaaaacaccttgatatgcctactgtt
gaagagattcaggattgcgttgagcgtgttcttattgaggagggcatggctgatactgca
aaaagttatatactctaccgctcaaacagaactcgtgcaagagaaatgaatacccgtctt
atgaaagtttatgaggatcttactttccaatcagcgaaagataacgatttgaagcgtgag
aatgctaatatagacggcgataccgcaatgggtacaatgcttaaatacggatctgtggga
gcaaaggagttcaatgagatgtatgttcttgctcctgagcattcaaaggctcatcaggaa
ggggatatccacattcatgatcttgatttttatacactgactaccacttgcacccagata
gaccttacaaagctttttgataagggtttttctacaggtcatggctttttgcgtacacct
aatgatatacaaagctatgcggcgcttgcctgcattgcgatacaatccaatcagaacgac
cagcatggtggtcaatctcttccgaagttcgattatgatatggctgagggcgtaagaaag
acattcagacaccgctatcgtgacaatatcggcaggggtcttgctctccttggtgaagtt
tctgatgctcagagcattgcaaagaaaataactgaaatgcttgatgagcagggtttaaag
atcactctcgccaatgataacggctatcaagaggctgaagcacagtttcttgtgaatttt
gtcgacgcacctatagtgaagaagatacagagttttgcatataaaaactctttgaaagaa
actgacagagccacatatcaggcaatggaagcgcttatccataatcttaataccatgaac
tcccgtgcaggcgctcaaacgcctttcagctccataaattatggtactgatacttctatc
gagggcagacttgttataaagaatattcttcttgcagaggaagcaggacttggcaatggt
gaaacgcctattttccctatacatattttcaagataaaagagggcgtgaactttgatcct
gatgacccgaactatgaccttttcaagcttgcttgccgtgtatcagcgaagcgtcttttc
ccgaatttttcatttatcgacgctcctttcaatctacagtattacaaagagggcaatcct
gacactgagatagcctacatgggttgccgcacaagagttatcggtaacgcatatgaccct
actcgtgagatagtgacaggcaggggaaatctctcttttactaccattaatctccctaga
cttggcataaaagcacagcgtaatatcggtgctttctttgacagccttgatgagcttatg
gatctttgtatcgaccagcttatgcacagatttaagatacagtgttcaaagcgtgtgaga
aattatccgttcctcatgggtcagggcatatggctcgattcagagaagcttacggctgac
gatacgcttgaagaagtgttaaagcatggcacgctttccgtgggctttatcggtcttgct
gagtgtcttaaagtgcttactggcaagcaccatggtgaaagtgaagaagcaagagagctt
ggcttggagataatctcacgtatgagagcaagaatggacgaggaaacaaagcgtactggt
cttaacttctcgttgcttgcaacgcctgctgagggactttctggcagatttgttaaaatg
gatagagaacgttatggcgagatagcaggagttacggacagagaatattatactaattct
ttccatgtacctgtttactatccgataacagcgtttgagaaacttaaaatagaagctcct
taccatgctcttacaaatgcaggtcatataagctatatcgagcttgacggcgatccgctg
aacaatctttctgcattcgagaaagtcgtaagatatatgaaagaagttggcataggctac
ggctcaataaaccaccctgttgaccgtgatcctgtttgcggatatactggaataataggt
gacaaatgcccgaagtgtggacgttctgaggctgaacacagcaaggtgatacatgagagg
atacctcgtgcaaaagcctgctgtgagggtgacaattag
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