Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01493
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Entry
RBI_I01493 CDS
T03158
Name
(GenBank) Glycoside Hydrolase Family 5 protein
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00500
Starch and sucrose metabolism
rus01100
Metabolic pathways
rus02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RBI_I01493
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBI_I01493
Enzymes [BR:
rus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
RBI_I01493
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Gene cluster
GFIT
Motif
Pfam:
Cellulase
DUF4038
DUF4434
Glyco_hydro_35
Motif
Other DBs
NCBI-ProteinID:
CCO05195
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Position
I:complement(1660528..1662315)
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AA seq
595 aa
AA seq
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MEKFRLIPLLTAAVMGCTALLAGCGKGSDSSSSKAEEGAKTSDDGSINKDLTSTELARLL
GNGTNLGNTMEAYGHKSYSADTDPESFETFWGQPVTTEEMIKGMKASGFDSLRVPVAWTN
AMEYEKGDYTINEAYLDRVEEVINYALDNDMYVIINDHWDGSWWGMFGSSKQSDVDKAFE
MYKSMWTQIANRYKKYSDRLIFEGANEELGDRLNDTDVCKNSGSLSKAECYEMANKINQT
FVDTVRATGGNNEQRFLLIAGYNTDITMTCSNKFQMPTDTAKDKLLLSVHYYTPWDYCGT
KGRSDWGTKTDYEEQNRLFKNMTKYSEQGYGIIIGEYAVLTNGGDLKKGTDKFIDNLLDN
CDAYGFAPFLWDCSDFFSRSELKMRDETVAKIFDERRRDNQSSMTVEEERAAAVKKLDET
LAAAPEKLTDDTAPQADENTAVAWIMYQSADFSVCYSVGDEYDPVSKSDGVIAENAVIDG
EGTYTVSLDMSSNNANGIAFSALGIANGEKLYPNYIATIDEIKINGEAVETLAEGYTTSD
DQLCTRVNLVNQWVSTPPEDARIAGGDLSKASPIILDYAGKINTLEITFTYAPAA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtttaggcttatcccgcttcttactgcagcggtcatgggctgtactgcactg
cttgcaggctgtggaaagggaagcgacagctcttcatcaaaggcagaggagggcgcaaag
acctctgatgacggaagtataaacaaagaccttacatcaaccgagcttgcaagacttctg
ggcaacggcacaaaccttggcaacacaatggaggcatacggtcataaaagctattccgca
gacaccgaccctgaaagctttgaaactttctggggtcagcctgtcacaacggaagaaatg
ataaagggcatgaaagcaagcggttttgactctctccgtgtgcctgtggcatggacaaac
gcaatggagtatgaaaaaggcgattacaccataaatgaagcctatctcgacagagtggag
gaggtaataaactacgctttggataatgatatgtatgttatcataaacgaccactgggac
ggaagctggtggggaatgttcggttcttccaagcagagcgacgttgacaaggcgtttgaa
atgtataagtccatgtggacgcagatagcgaacagatataaaaaatactccgacagactt
atatttgagggtgcaaacgaagagcttggtgacaggctcaatgacacagacgtgtgcaaa
aactcaggctcgctttcaaaagccgagtgctatgaaatggccaacaagataaatcagacc
tttgttgacactgttcgtgcaacaggcggaaacaacgaacagcgttttcttcttatcgca
ggctacaataccgatatcacaatgacctgctcaaacaagttccaaatgccaactgatacc
gcaaaggataagctcctgctttctgttcattattatactccatgggattattgcggaaca
aagggtcgctcagattggggaacaaagacagactatgaggagcagaacagacttttcaag
aacatgacaaagtattccgagcagggctatggcataataataggcgagtatgcagtgctt
acaaacggcggtgacctaaagaaaggaactgacaagtttattgacaacctccttgacaac
tgtgacgcctacggctttgcaccattcctttgggattgcagtgatttcttctcacgttca
gagcttaaaatgcgtgatgaaactgtggcaaagatatttgatgaaagacgccgtgataac
cagtcctcgatgacagtggaggaggaaagagccgctgctgtaaagaagcttgatgaaacc
cttgcggctgcacctgaaaagctaacagatgataccgcaccgcaggctgacgagaacaca
gcggtggcatggataatgtatcagagtgcagatttttccgtatgctacagcgttggtgac
gagtatgatccggtttcaaagagcgacggagttatcgcagaaaacgcagttatagacggt
gagggaacttacacagtaagccttgatatgtcatcaaacaacgccaacggcattgcattc
tcggctttgggtatcgcaaacggtgagaagctttatccgaactatatcgcaactattgac
gagataaagataaacggcgaagctgttgaaaccctagcggagggctatacgacctctgac
gaccagctttgcacaagagtgaatcttgtgaaccagtgggtatccacaccgcctgaggac
gcaaggatagcaggcggtgacctttcaaaggcttctccaataatacttgactatgcagga
aagataaacacccttgaaataacattcacatacgctcctgcggcataa
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