Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01505
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Entry
RBI_I01505 CDS
T03158
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease, patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rus03400
]
RBI_I01505 (vsr)
DNA repair and recombination proteins [BR:
rus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RBI_I01505 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
CCO05207
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All DBs
Position
I:1676308..1676781
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AA seq
157 aa
AA seq
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MLCLQYLLKLSLSILHHTWIKRKMADNHSKEVRSMNMSHIRSKDTKPEIIVRSFLHRKGF
RFRKNDKRYPGKPDVVLPKYKTAIYINGCFWHVHNCDNFVWPKSNTEYWTNKLINNKKRD
KKYHDQMREKGWKVIVIWECEINEDRLQRLISEIKGE
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcctccaatacttgctaaagctatcgctgagcatcttgcatcatacttggatc
aaaagaaaaatggctgataatcatagtaaagaagtccgcagtatgaatatgtcacatatt
cgcagcaaggataccaaacctgaaatcatagttagaagttttcttcatcgcaaaggcttt
cgtttcagaaaaaatgataaacggtatcctggtaaacctgatgttgtactgcctaaatat
aaaaccgcaatctatatcaatgggtgtttttggcatgtgcacaattgtgataattttgta
tggcccaaatcaaacacagaatattggacgaataagcttattaataacaaaaaacgtgac
aaaaaatatcatgaccaaatgagagagaaaggctggaaagttattgttatttgggaatgt
gaaattaatgaggacaggctacaacgtcttatttctgagattaaaggagaataa
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