KEGG   Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01525
Entry
RBI_I01525        CDS       T03158                                 
Symbol
hsdR
Name
(GenBank) Type I restriction enzyme, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rus  Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:rus00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rus02048]
    RBI_I01525 (hsdR)
Enzymes [BR:rus01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RBI_I01525 (hsdR)
Prokaryotic defense system [BR:rus02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RBI_I01525 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N AAA_34 HSDR_N_2 SLFN-g3_helicase AAA_19 Helicase_C SNF2-rel_dom AAA_11 AAA_22
Other DBs
NCBI-ProteinID: CCO05227
LinkDB
Position
I:1696829..1699165
AA seq 778 aa
MTILAKKEMSEEDIKLQFITPAILDKWDKNRITMETRITDGKICLNGNFVHRDKKSAKFA
DYVLYWSSSFPIAIVEAKDNNHSVSFGLQQAIAYAQMMDVPFVYSSNGDAFYEHDMLTGM
ECEIALDDFPTPNELMERYKANANGGQGLSENELAVISQPYYSSQNTYEPRYYQRVAVNR
TVDAIARGVMRLLLVMATGTGKTYTAFQIVYRLLKSGMKRKILYLADRNILVDQSIQQDF
SPLEKVIHKINVAKDNKTTITSHQVYFSLYQQLIGDDDKEHFSELFDKDFFDLIIVDECH
RGSAKEDSKWRRILDYFSSATQIGMTATPKETTYTSNISYFGEPIYTYSLKNGIEDGFLA
PFKVISITTDISDGWRPLKGQRDYYGNEIEDRIYNNTDYDYNIIIQDRINQVALEITNYL
ISTDRMQKTIVFCATEDAAERMRVALVNFNKDMVAQNPDYVVRITGSDEYGKSKLDYFIS
VGSPYPVIATTSKLLSTGADCKMTKLIVLDENIGSMTEFKQIIGRGTRLREKEGKTHFVV
MDFRGVTRLFYDKKWDGPIEIDPNYHPPKPKEGPDIIVDPPAPPPEPQEKPYVDVNGCTV
RIINKVVSVYDADGKLLRHENIIDYTRTNILGEYADLEHFIRSWNGEEKKKTISELFKEH
GIDLQALKESQGMGDIDDFDFIIHVAFDKKPLTRRERANDVKKRDFISKYSGMAREVIEA
LLEMYSNEGIYQIEDTQVLKLDPFIRMGKPVALVKLFGGKDGYLQAIRELEEEIYKVV
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgaccatacttgcaaaaaaagaaatgtcagaagaggatataaagcttcaattcattact
cctgctattcttgataagtgggataaaaacagaattacaatggaaacaaggatcaccgac
ggtaagatctgtctgaacggtaactttgtccatcgtgataagaaaagcgccaagtttgcc
gattatgttctgtattggagcagcagtttccccatagcgatagttgaggctaaggacaat
aaccatagcgtatcattcggcttacaacaggctatagcttatgctcagatgatggatgta
cctttcgtttacagctccaatggtgatgctttctatgaacacgatatgctgacaggtatg
gagtgtgaaattgcacttgatgatttccctacacctaatgagcttatggaacgatacaag
gcaaatgcgaacggcgggcaagggctgtcagagaatgagcttgcagtcatcagccagcct
tactattcaagccagaatacctacgagccaagatattatcagcgagtggcagtaaaccgt
actgttgatgctattgctcgtggtgtaatgagactcctgctcgtcatggcaacaggcacg
ggcaagacctatactgcgttccagatcgtgtaccgtctgcttaaaagcggtatgaagcgt
aagatactgtatcttgccgacaggaatattcttgtggatcagtctatacagcaggatttc
tctccgcttgaaaaggtcatccacaagatcaatgttgctaaggataacaaaaccactatc
acctcacatcaggtctatttctcgctgtatcagcagttgatcggtgatgatgataaggag
catttctccgagctgtttgacaaggatttctttgaccttattatcgtagatgagtgtcac
agaggcagcgccaaagaggatagcaagtggcgcaggatactggattacttctcctcggct
acacagatcggtatgaccgctactccgaaggagacaacatatacttctaacatttcgtat
tttggcgaaccgatctacacatactccctcaaaaacggcattgaggacggatttctcgcc
ccgtttaaggtcatcagcatcacaacagacattagtgacggctggagaccgctgaaagga
cagcgagattattacggcaacgaaattgaggacaggatatacaacaataccgactatgac
tacaatatcatcattcaggacagaatcaaccaggttgcccttgaaattacgaactacctt
atcagcacagaccgtatgcagaaaacgatagtattctgtgcgacagaggacgctgcggag
cgtatgagagtggctcttgtcaacttcaataaggatatggttgctcagaatcctgattat
gtggtgcgtatcacaggctcggacgagtacggcaagagcaaactcgattacttcatttct
gtcggctctccttatcctgttatcgccacgacttccaagctcctgtctacgggtgcggat
tgcaaaatgaccaagctgatcgtgcttgatgaaaatatcggctctatgactgagttcaag
cagatcatcggcagaggtaccagactgcgtgaaaaagagggcaagacgcactttgtagtt
atggatttcagaggtgtgacaaggctgttctacgataaaaagtgggacggtccgattgaa
attgatccgaactatcaccctccgaaaccaaaagagggaccggatattattgtcgatccg
cctgcacctcctcctgagccgcaggaaaagccctatgttgatgtgaacggctgtactgtc
cgtatcatcaacaaggtggtatcggtgtacgatgccgacggcaagctcctccgacatgag
aacatcatagactatacaagaacaaatatcctcggagaatacgccgacttagagcatttt
atcagaagttggaacggcgaggaaaagaaaaagaccatatctgagcttttcaaggaacac
ggcattgacctgcaagcgctgaaagaatcgcagggtatgggtgatattgacgattttgat
tttatcattcatgttgcgttcgacaagaaaccgctgacacggagagagcgtgcgaatgat
gtgaagaagcgtgacttcatcagcaagtacagcggaatggcaagagaggtcatagaagct
ctgcttgaaatgtactccaacgagggtatctatcagatagaggatacgcaggtattgaag
cttgatccgtttattagaatgggcaagcctgtcgcacttgtcaagctgtttggtggtaag
gacggctatttgcaggcgatccgtgagcttgaagaagaaatatacaaggtggtataa

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