Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01651
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Entry
RBI_I01651 CDS
T03158
Name
(GenBank) b-mannanase; b-1,3-xylanase (Carbohydrate-Binding Module Family 35 protein / Glycoside Hydrolase Family 26 protein)
KO
K01218
mannan endo-1,4-beta-mannosidase [EC:
3.2.1.78
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00051
Fructose and mannose metabolism
rus01100
Metabolic pathways
rus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
RBI_I01651
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBI_I01651
Enzymes [BR:
rus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.78 mannan endo-1,4-beta-mannosidase
RBI_I01651
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_26
CBM_35
CBM_6
Motif
Other DBs
NCBI-ProteinID:
CCO05353
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Position
I:complement(1812219..1813871)
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AA seq
550 aa
AA seq
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MREIMKRTVAAVMAVLIACAAAGCSSTGNSSSGSSSAGETTTTTAPVVEDMGNIDLSDVT
TEYDVPEDFSYESEAEKGTLSGGAAVLDKNFLGKFSGDGFVSIGSSGDMVEFEIDFPAKG
SYNITLTMAADGEGQSNLITVDGAALTNFTSTTTEFGDTMAENVLIDEGTHKVGIKGDNG
HIYIDKIKITPAPAIDLSQYEVSNQLSNPNASDEAKRLYNFLTDVYGKYTISGQFSGDNE
GKDCREFKEIKKHTGKTPAILGLDVSNLSNSALSHGAGGGDMVPLQAMDWYNNENGIVSL
CWHWYAPDKNLEKNGGAWWQGFYSEYTDFDLAKALSGEDKEGYDSIIADLDHMAGVLKEL
ADANVPILWRPLHEAAGDPKYPGNAWFWWGSAGKDAYIQLWQLMYDKFTNEYGLNNLIWV
WNAQNPDWYPGDEYVDIMGYDCYPAEQDSSSQKWYYDLVKSSTSTKKIIAMTENGSMFDP
DGAFNDGTRWAWFSTWNGEFCIKDKQLSDQYTTFDEWNKIYNSERVLTLDELPNLKCYPM
DTEKYLEEHK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaataatgaaaagaacagttgctgccgttatggcagtgcttatcgcttgtgcg
gcagcaggctgcagcagcacaggaaacagcagctcaggcagctcgtcagcaggcgaaact
accactacaacagctcctgtcgttgaagatatgggcaacatcgacctttcagacgtaacg
acagagtatgacgttcctgaggatttcagctacgaatccgaggcggaaaaaggaactctt
tcgggaggtgcggcagtgcttgataagaattttcttggtaagttttctggcgatggcttc
gtttccataggctcatcgggagatatggtggagttcgagatagattttcctgcaaaggga
agctataatattactctcacaatggcggcagacggcgagggtcagtcaaatcttatcact
gttgatggtgctgcgctcacaaacttcacatcaaccacaacagagtttggcgacactatg
gctgaaaatgtgcttatcgacgaaggtactcataaggtaggcataaagggcgacaacggt
catatctatattgacaagataaagataaccccggctcctgctatcgacctttcacagtat
gaggtatcaaatcagctttcaaatcctaacgcttctgacgaggcaaaaagactttataac
ttccttacggacgtttatggcaagtatactatctcaggtcagttttcaggagataacgag
ggcaaggactgccgtgagttcaaggagataaagaagcatacaggcaagacgcctgctata
cttggtcttgacgtttcaaacctttcaaacagcgcactttcacatggcgcaggcggcgga
gatatggtgccattgcaggctatggactggtacaacaacgaaaatggtatagtttcactt
tgctggcattggtatgcccctgataaaaacctggaaaagaacggcggagcatggtggcag
ggcttctattctgaatacacagacttcgaccttgcaaaggctctcagcggtgaggacaaa
gagggctacgattctatcatagcagaccttgaccatatggcaggggtacttaaagagctt
gcagacgcaaacgtgcctatactttggcgacctctccacgaggcggcaggcgaccctaag
tatcctggcaacgcatggttctggtggggttcagcaggaaaggacgcatatattcagctt
tggcagctcatgtatgacaagttcacaaacgagtatggtcttaacaacctcatctgggta
tggaacgcacagaatcctgactggtatccgggtgatgagtatgttgacatcatgggctat
gactgttatcctgcagagcaggacagctcttcacagaagtggtattatgaccttgtgaag
tcaagcacatccacaaaaaagataatcgcaatgacagagaacggctcgatgttcgaccct
gacggagcattcaacgacggcacacgctgggcgtggttcagtacatggaacggcgagttc
tgtatcaaggataaacagctttcagatcagtacaccacatttgacgagtggaacaagatc
tacaacagcgaaagagttctcacccttgacgagcttccaaacctgaaatgctatccaatg
gatactgaaaagtatctggaggagcataagtaa
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